ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1643_3

Organism: SCN18_25_8_15_R2_B_Microbacterium_70_11

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 13 / 38 MC: 4
Location: comp(2160..2711)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000377EB9F similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 178.0
  • Bit_score: 216
  • Evalue 1.60e-53
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EWC60265.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 175.0
  • Bit_score: 193
  • Evalue 2.00e-46
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 173.0
  • Bit_score: 179
  • Evalue 7.90e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGACGGAGACGAGGACGCGCGCGGAGCGTCGGGCAGCGACGGCGGACCGCATCCTGAGGGCCGCGCAGGAGGAGTTCGGCGAGCGGGGGATGGAGGGCGCCACGATCCGAGGGATCGCGCGCCGAGCCGGGGTCGACCCCTCGCTCGTTATGCAGCACTACGGATCCAAGCAGGCGCTGTTCTCGCTCGCCGTGCGTCCGGACCCGGCGCTCGCCGCGTCGGAGGTGCCCCGGCATCTGGTCGAGGTGCTGACGATCCGCCTCCGCGAACTTCCGCCCGAGACCAGGGTGCTCCTCCGCTCGATGCTGACGTCAGCCGAGGCGGGCGCGGTCATGCGCGACTACCTGCAGGAGCGCGTCGCCGACCTCGCCCGCGCGAGCGACCGCGACGACGCCGAGGTGCGCGCGACCGTGCTCGTCTCCAGCATCCTCGGACTGACCCTGGCGCGGCACTTCCTCCACCTCCCCGCGCTGCAGGACCTCGACGACGCGACGATCGACACGCTCGTCCAGCCGTGGTTCGCCACGATGGCGGATCCGAGCGCGCGCTGA
PROTEIN sequence
Length: 184
MTETRTRAERRAATADRILRAAQEEFGERGMEGATIRGIARRAGVDPSLVMQHYGSKQALFSLAVRPDPALAASEVPRHLVEVLTIRLRELPPETRVLLRSMLTSAEAGAVMRDYLQERVADLARASDRDDAEVRATVLVSSILGLTLARHFLHLPALQDLDDATIDTLVQPWFATMADPSAR*