ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2381_4

Organism: SCN18_25_8_15_R2_B_Microbacterium_70_11

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 13 / 38 MC: 4
Location: comp(1325..2164)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L2 n=2 Tax=Microbacterium RepID=H8E521_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 279.0
  • Bit_score: 564
  • Evalue 3.60e-158
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 279.0
  • Bit_score: 564
  • Evalue 5.10e-158
rplB; ribosomal protein L2 similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 279.0
  • Bit_score: 551
  • Evalue 8.90e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGGCAATTCGCAAGTACAAGCCCACGACCCCCGGTCGTCGCGGCTCGTCGGTGTCCGACTTCGCGGAGATCACCCGATCGACGCCGGAGAAGTCGCTGCTGCGCCCGCTCTCCAAGACGGGCGGCCGCAACAACCAGGGTCGCATCACGACCCGTCACATCGGTGGCGGCCACAAGCGCCAGTACCGCGTGATCGACTTCCGTCGCAACGACAAGGACGGCATCGACGCGAAGGTCGCGCACATCGAGTACGACCCCAACCGCACGGCGCGCATCGCGCTCCTGCACTACGTGGACGGCGAGAAGCGCTACATCCTCGCGCCGAACAAGCTCTCGCAGGGCGACATCGTCGAGTCCGGTGCGGGCGCCGACATCAAGCCGGGCAACAACCTGCCGCTGCGCAACATCCCCACCGGTACCGTGATCCACGCCATCGAGCTCCGCCCCGGCGGCGGCGCGAAGCTGGCCCGGTCGGCCGGCGCGTCCGTCCGCCTGGTGGCGAAGGACGGCCCCTACGCGCAGCTGCGCCTGCCCTCGGGCGAGATCCGCAACGTCGACGCGCGCTGCCGCGCCACGATCGGCGAGGTCGGCAACGCCGAGCAGTCGAACATCAACTGGGGCAAGGCCGGCCGCAACCGCTGGAAGGGCATCCGCCCGACCGTCCGCGGTGTCGCGATGAACCCGGTCGACCACCCGCACGGTGGTGGTGAGGGCAAGACCTCCGGTGGTCGTCACCCGGTGTCGCCGTGGGGGCAGGCAGAGGGTCGCACCCGCCACGCCAACAAGGAAAGCGACAAGTACATCGTTCGCCGTCGCAACGCCGGCAAGAAGCGCAAGTAG
PROTEIN sequence
Length: 280
MAIRKYKPTTPGRRGSSVSDFAEITRSTPEKSLLRPLSKTGGRNNQGRITTRHIGGGHKRQYRVIDFRRNDKDGIDAKVAHIEYDPNRTARIALLHYVDGEKRYILAPNKLSQGDIVESGAGADIKPGNNLPLRNIPTGTVIHAIELRPGGGAKLARSAGASVRLVAKDGPYAQLRLPSGEIRNVDARCRATIGEVGNAEQSNINWGKAGRNRWKGIRPTVRGVAMNPVDHPHGGGEGKTSGGRHPVSPWGQAEGRTRHANKESDKYIVRRRNAGKKRK*