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SCN18_25_8_15_R2_B_scaffold_4136_1

Organism: SCN18_25_8_15_R2_B_Microbacterium_70_11

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 13 / 38 MC: 4
Location: comp(2..1624)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 541.0
  • Bit_score: 1035
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Microbacterium RepID=H8E542_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 541.0
  • Bit_score: 1035
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 541.0
  • Bit_score: 1034
  • Evalue 0.0

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1623
GTGCTCGAATCAACCACTTTCGACCAGCTTCGCATCGGCCTGGCCACCGCAGACGACATCCGTCGCTGGTCCTACGGCGAGGTCAAGAAGCCGGAGACCATCAACTACCGCACCCTGAAGCCCGAGAAGGACGGCCTGTTCGGCGAGCAGATCTTCGGTCCCTCGCGGGACTGGGAGTGCGCGTGCGGCAAGTACAAGCGCGTCCGCTTCAAGGGCATCGTCTGCGAGCGCTGCGGCGTCGAGGTCACCAAGTCCTCGGTCCGTCGCGAGCGGATGGGCCACATCGAGCTCGCCGCGCCCGTCACGCACATCTGGTACTTCAAGGGCGTCCCGTCGCGCCTCGGGTACCTGCTGGACATGGCGCCGAAGGACCTCGAGAAGGTCATCTACTTCGCCGCGTACATGGTGATCTCGGTCGACGAGGAGGCGCGTCACCGCGACCTCCCGACGCACGAGAACAACCTGCGCCTCGAGATGAAGACGATCGCGGACCGCCGCGACGCCCGCATCGCGACCCGCCTCCAGAAGCTGGAGGAGGAGCTCGCCGCGCTCGAGGAGGAGGGCGCCAAGGCCGACCAGAAGAAGAAGGTCAAGGACGCCGCCGAGAAGGAGATGTCCGCCACCCGCAAGAACGCGGACGAGCAGATCGCGAAGCTCGAGCGCGTGTGGGAGGACTTCCGCACCCTCGAGGTCGGCGCCCTCAAGCCCGAGGACGACGTCTTCCACGAGCTGCAGGACCGCTTCGGCCAGTACTTCGAGGCCTACATGGGCGCGGAGTCGATCCAGCGCCGCCTGCAGGCCTTCGACCTGGCCGCCGAGTCCGAGAGCCTGCACCTGCAGATCTCGGAGGGCAAGGGTCAGCGCAAGATCCGCGCGATCAAGCGCCTGCGCGTGGTCAACTCGTTCCTGCAGACCGGCATGAGCCCGGCCTCGATGGTCCTCGACGTCGTCCCGGTGATCCCGCCGGAGCTGCGCCCGATGGTGCAGCTGGACGGCGGCCGCTTCGCGACCTCCGACCTGAACGACCTGTACCGTCGCGTGATCAACCGCAACAACCGCCTCCGCCGTCTGATCGACCTCGGTGCCCCCGAGATCATCGTCAACAACGAGAAGCGGATGCTGCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGTCGCGGCCGCCCCGTCACGGGCACGGGCAACCGCGCGCTCAAGTCCCTGAGCGACATGCTCAAGGGCAAGCAGGGCCGGTTCCGCCAGAACCTGCTCGGCAAGCGCGTGGACTACTCGGGCCGTTCGGTCATCATCGTCGGCCCGCAGCTGAAGCTGCACCAGTGCGGTCTGCCCAAGCAGATGGCGCTCGAGCTGTTCAAGCCGTTCGTGATCAAGCGCCTCATCGACCTCGGTCACTCGCAGAACATCAAGGCCGCCAAGCGCGCCGTGGAGCGCACGCGCCCCGAGGTGTGGGACGTGCTCGAGGAGATCATCCGCGAGCGCCCCGTGCTCCTGAACCGCGCGCCCACGCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCGCAGCTCGTGGAGGGCAAGGCCATCCAGCTGCACCCGCTCGTGTGCGCGGCGTTCAACGCCGACTTCGACGGCGACCAGATG
PROTEIN sequence
Length: 541
VLESTTFDQLRIGLATADDIRRWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWECACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDMAPKDLEKVIYFAAYMVISVDEEARHRDLPTHENNLRLEMKTIADRRDARIATRLQKLEEELAALEEEGAKADQKKKVKDAAEKEMSATRKNADEQIAKLERVWEDFRTLEVGALKPEDDVFHELQDRFGQYFEAYMGAESIQRRLQAFDLAAESESLHLQISEGKGQRKIRAIKRLRVVNSFLQTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTRPEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQM