ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3107_4

Organism: SCN18_25_8_15_R2_B_Microbacterium_70_11

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 13 / 38 MC: 4
Location: comp(4112..5278)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 388.0
  • Bit_score: 684
  • Evalue 7.90e-194
tRNA-dihydrouridine synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CB093 similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 388.0
  • Bit_score: 691
  • Evalue 2.70e-196
nifR3; tRNA-dihydrouridine synthase similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 388.0
  • Bit_score: 655
  • Evalue 6.10e-186

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
GTGACCCTCACCACAGCACCCGCACCCGCGCTGCGCATCGGGCCGATCGGCCTCCCCGCGCCCGTCGTGCTGGCGCCGATGGCGGGAATCACCAACACGGCGTTCCGACGACTCTGCCGCGAGTACGGTGCCGGACTCTACGTGAGCGAGATGATCACGACGCGTGCGCTCGTCGAGCGGAACGCCACCACGATGCGTCTGATCCGGCACCACGAGTCCGAGACCCCGCGGTCGATCCAGCTCTACGGCGTCGACCCCGCCACCGTCGCCGCCGCGGTCCGCATCATCGTGGCGGAGGATCACGCCGACCACATCGACCTCAACTTCGGCTGCCCGGTCCCCAAGGTGACGCGGAAAGGCGGGGGCGCTGCGCTGCCGTGGAAGCTCGACCTCTTCCGGCAGATCGTCACGGGTGCCGTCCAGGCGGCCGGCGACGTGCCGGTGACGGTGAAGATGCGCAAGGGCATCGATACCGACCACCTCACCTTCCTCGACGCCGGCCGCATCGCGGAGGACGCCGGGGTCGCCGCCGTCGCTCTCCACGCGCGCACCGCGGCCGAGTTCTACTCCGGTACCGCGGACTGGTCCGCGATCGCCGCGCTCAAGGCGGCGGTGACGAGCGTGCCGGTCCTGGGCAACGGCGATATCTGGTCGGCGGACGACGCCGTGCGGATGATGGCCGAGACGGGCTGCGACGGCGTCGTCGTGGGGCGCGGATGCCTCGGCCGTCCGTGGCTCTTCGGCGACCTCGCCCGGGCCCTCGGCGAGCCCGGCTCGGCGCCCGCCGATCCGGTGGACGCGACGCTCGGGTTCGTCGCTCAGGCGTTCCGCCGCCACGCGGAGCTGCTGGTGGAGTTCTTCGAGGACGAGGATCGCGGCTGCCGCGACATCCGCAAGCACGTCGCCTGGTACTTCAAGGGCTACCCCGTGGGCGGCGAACTGCGCGCACGTCTCGCCACTGCGTCGAGTCGCGTCGAGATCGACGACCTGCTCGCCGAGCTCGATCTCGACGCGCCGTACCCCGGCGCCGCCGCCGAGGGGCAGCGGGGTCGCGCCGGGACGCCGAAGAGGCCGGCTCTCCCGGACGGGTGGCTCGCGTCGCGCGACCTCGGCGCCGCGGCATCCTCCGCCCTGGCCGGCGCGGAACTGGATCACAGTGGCGGTTGA
PROTEIN sequence
Length: 389
VTLTTAPAPALRIGPIGLPAPVVLAPMAGITNTAFRRLCREYGAGLYVSEMITTRALVERNATTMRLIRHHESETPRSIQLYGVDPATVAAAVRIIVAEDHADHIDLNFGCPVPKVTRKGGGAALPWKLDLFRQIVTGAVQAAGDVPVTVKMRKGIDTDHLTFLDAGRIAEDAGVAAVALHARTAAEFYSGTADWSAIAALKAAVTSVPVLGNGDIWSADDAVRMMAETGCDGVVVGRGCLGRPWLFGDLARALGEPGSAPADPVDATLGFVAQAFRRHAELLVEFFEDEDRGCRDIRKHVAWYFKGYPVGGELRARLATASSRVEIDDLLAELDLDAPYPGAAAEGQRGRAGTPKRPALPDGWLASRDLGAAASSALAGAELDHSGG*