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SCN18_25_8_15_R2_B_scaffold_5333_4

Organism: SCN18_25_8_15_R2_B_Microbacterium_70_11

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 13 / 38 MC: 4
Location: 4449..5642

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Microbacterium RepID=H8E186_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 412.0
  • Bit_score: 490
  • Evalue 9.40e-136
Regulator {ECO:0000313|EMBL:EXJ51100.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 419.0
  • Bit_score: 505
  • Evalue 6.80e-140
hemagglutinin/hemolysin-like protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 392.0
  • Bit_score: 384
  • Evalue 3.50e-104

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGACATCGAACGACGCCGACGACGCGGCGATGCTGCACGACACGGCCGACGCCGACCTCGTGACGCGCACCCGCGCCGGCGACAGCGCGGCCTTCGGCGAACTCTGGCGCCGGCACTATGCGTCCGGGATGAGCGTCGCGCGGTCGGTCACGTCGAGCATCGATCCCGACGATCTCGTGCAAGAGGCCTACGTGCGGATCTTCCAGTCGATCCAGCGCGGCGGCGGCCCGACCGGCTCCTTCCGGGCGTACCTCTTCACGAGCATCCGCAACACGGCGGCGGCGTGGGGGCGCTCGCGACGCGAGACCGCCGTCGACGAGTGGGAAGCGGTGGCGGATCCGTCCTCCACCGAGCGCGCCGCCGACGACGCACTCGACCGCAGCCTCACCCATCAGGCCTTCCGGAGCCTGCCCACCCGATGGCAGGAGGTGCTCTGGTACACCGAGATCGAGCAGATGAAGCCGGGCGAGATCGCCCCGCTGCTCGGCCTGCGCGCGACCGCGGTGGCACAGCTCGCGTTCCGCGCCCGGGAGGGACTGCGTGAGGCGTGGATCCAGGCGCACCTGAAGTCGGTCGAAGACGGCTCCGACTGCCAGTGGACGATCGAACGCCTCGGCGCCTATTCGCGCAACAACCTGGGCAAGCGCGATCTGGCGAAGATCGAGAAGCACCTCCACGACTGCGCCCGCTGTGCGATCGTCGCCTCGGAGGCGAAGGAGGTCTCCGGCCGGCTGGTGCTCATCCTGTTGCCGCTCACGATCGGGATCGGGGCCAGCGCCGCCTACCTCGCGTCGGTGCAGGGCGGTGGCGCTCCCCTCACGGCGATGGCCGGGATGCCGTCGGGCATCGCCCCCGGCGCCGTGGTCGCGTCCGGCGGCACGGCGGGCGGAGGCGGCACGACCTCGTCGGCGGGATCCGCGGCGGCCGGACCGACGGCGGCGGGGACCGGATCGGCGGGCGTCGGTGTCGGCGGAGCCGTGGTCGGCACCGGCACGCTGACGGCGCTCATCACCGCGGGCGCGCTGGTGGCGGCGACGGTCGTGGCCGCGGTCGTCGTGCCCGCCGCGTTGCGCGCCCCGACGAGCACCGAGCGCCTCGACGCCGCGGGGCCCGCCGTGGTCGAGACGACAACGCCATCGGCCACCCCGACCCCGACGGCGATACCGACCGCGTCGCCCCGCCCGAGCGATGTG
PROTEIN sequence
Length: 398
MTSNDADDAAMLHDTADADLVTRTRAGDSAAFGELWRRHYASGMSVARSVTSSIDPDDLVQEAYVRIFQSIQRGGGPTGSFRAYLFTSIRNTAAAWGRSRRETAVDEWEAVADPSSTERAADDALDRSLTHQAFRSLPTRWQEVLWYTEIEQMKPGEIAPLLGLRATAVAQLAFRAREGLREAWIQAHLKSVEDGSDCQWTIERLGAYSRNNLGKRDLAKIEKHLHDCARCAIVASEAKEVSGRLVLILLPLTIGIGASAAYLASVQGGGAPLTAMAGMPSGIAPGAVVASGGTAGGGGTTSSAGSAAAGPTAAGTGSAGVGVGGAVVGTGTLTALITAGALVAATVVAAVVVPAALRAPTSTERLDAAGPAVVETTTPSATPTPTAIPTASPRPSDV