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SCN18_25_8_15_R2_B_scaffold_23405_2

Organism: SCN18_25_8_15_R2_B_Microbacterium_70_11

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 13 / 38 MC: 4
Location: 764..1423

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 220.0
  • Bit_score: 333
  • Evalue 1.50e-88
tRNA pseudouridine synthase A n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEJ4_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 220.0
  • Bit_score: 331
  • Evalue 5.30e-88
truA; pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 220.0
  • Bit_score: 331
  • Evalue 1.50e-88

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
GTGCGGATCAGGCTCGACATCGCGTACGACGGAACGCATTTCCGCGGCTGGGCGCGCCAGCCGGGCCTTCGCACCGTGCAGGGCGCACTCGAGGACGCCATCGCGCGCATCCTCGGCGGAGAGGTCTCGCTGGTCGTCGCCGGACGGACGGATGCCGGAGTGCATGCGCACGGCCAGGTGGCGCACCTGGACCTCGACGCCGCCCAGGAGGAACGACTGCGCGCCACCACCCGGCGGGACGAGGCATCCGACCCCGTGGGCCGGCTCGCGCATCGTGTGCGAGGTGCGCTCGGCGCCTACAGCGACCTCGCCGTCCGCCGCGCGACCGTGGCGCCCGAAGGGTTCGACGCGCGCTTCAGCGCGGTCTGGCGGCGCTACGAGTACCGCGTCGCCGACGACGTGAGCGGCTACGATCCGCTCGAGCGCCTGCGGACCACGACCGTGCGTGGCCGGCTCGACGTGGCCCGCATGGATGCCGCCGCGCGCTCGCTGGTTGGCCTCCACGACTTCGCCGCCTACTGCAAGGCGCGCGAGGAGGCGACGACGATCCGTACCCTCCTCGTCTTCCAGTGGCGTCGCGACGCGGAGGGCGTGCTGGTCGCCGACGTCAAGGCCGACGCGTTCTGCCATTCGATGGTGCGTGCCCTCGTCGGCGCGTGC
PROTEIN sequence
Length: 220
VRIRLDIAYDGTHFRGWARQPGLRTVQGALEDAIARILGGEVSLVVAGRTDAGVHAHGQVAHLDLDAAQEERLRATTRRDEASDPVGRLAHRVRGALGAYSDLAVRRATVAPEGFDARFSAVWRRYEYRVADDVSGYDPLERLRTTTVRGRLDVARMDAAARSLVGLHDFAAYCKAREEATTIRTLLVFQWRRDAEGVLVADVKADAFCHSMVRALVGAC