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SCN18_25_8_15_R2_B_scaffold_17431_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13-related_73_8

near complete RP 44 / 55 MC: 1 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(2..727)

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 225.0
  • Bit_score: 226
  • Evalue 7.50e-57
Diaminopimelate epimerase {ECO:0000256|SAAS:SAAS00028055}; EC=5.1.1.7 {ECO:0000256|SAAS:SAAS00028063};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 225.0
  • Bit_score: 226
  • Evalue 3.70e-56
Diaminopimelate epimerase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BWM2_BEUC1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 225.0
  • Bit_score: 226
  • Evalue 2.60e-56

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Taxonomy

SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 → SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 726
GTGAGCGCACGCGAGACGTCCCGGTGGGCGGGCTGGCCGGTCCTGACGAAGGGTCACGGCACGGGCAACGACTTCCTGCTGCTCACCGACGCCGACGCCGCGCTCGCGCTGGACGCCTCCGCCGTGGCCGCCGTGGCCGATCGCCGGTTCGGGATCGGGGCCGACGGGGTCGTCCGGGCCGTGCGGACCGCGGCGCTGCGGGCCGTCGACCCCGACGTGGACCGGGCGCTCGCGGCCGACGCCTCCGGCGGTTCCGTCGGCGGTACGGTCGATGGCGACGCCGAGTGGTTCATGGACTACCGCAACGCCGACGGCTCGATCGCCCAGATGTGCGGGAACGGGCTGCGCGTGTTCGTCCGGTACCTGCTCGCGGAGGGGCTCGCGACGCTCGCGCCGGGGGAGACGCTGCGGGTGGGGACCCGCGCCGGCGTCCTCGGGGTGCGGCGGGCCGACGGTGACCGGCTCACCGTCGCGATGGGCCGGTTCGGCCTGCCCGGCGGCGCCGAGGCGCTCGCCCGGGGCAGCGACGCCGTCGTCGAGGTCGCGGGCCTCGACGGGGCGCGGCCCGGCCTGTCCGTCACGATGCCGAACCCGCACGTCGTCATCGCGGTCGCGACGCCGGAGGAGCTCGCGGGCGCGGACCTGACGCGCGCCCCGCGGGTCGTGCCGGTTCCGGACGAGGGGACGAACGTCGAGATCGTCAAGGTGCTCGGCGAAACGCCCGAG
PROTEIN sequence
Length: 242
VSARETSRWAGWPVLTKGHGTGNDFLLLTDADAALALDASAVAAVADRRFGIGADGVVRAVRTAALRAVDPDVDRALAADASGGSVGGTVDGDAEWFMDYRNADGSIAQMCGNGLRVFVRYLLAEGLATLAPGETLRVGTRAGVLGVRRADGDRLTVAMGRFGLPGGAEALARGSDAVVEVAGLDGARPGLSVTMPNPHVVIAVATPEELAGADLTRAPRVVPVPDEGTNVEIVKVLGETPE