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SCN18_25_8_15_R2_B_scaffold_20239_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13-related_73_8

near complete RP 44 / 55 MC: 1 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 3..953

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 309.0
  • Bit_score: 426
  • Evalue 3.20e-116
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FSI4_ISOV2 similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 309.0
  • Bit_score: 426
  • Evalue 2.30e-116
ribosomal RNA small subunit methyltransferase H similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 309.0
  • Bit_score: 426
  • Evalue 6.40e-117

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Taxonomy

SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 → SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 951
CGATGCGTCGAGCTTCTCGCCCCCGCGCTGCGGGAGCCCGGCTCGGTCCTCGTCGACGGCACGCTCGGCATGGGCGGCCACTCCGAGGCGGTCCTGGAGGCCCGCCCGAACGCGAGCGTCATCGGCATCGACCGCGACCTCCAGGCGATCGACCTCGCCTCGCGTCGACTGGCGCGGTTCGGGGAGCGCTTCCGCGCCGTCCACGCGACGTACGACGAGATCGACGAGGTCGTGGCGGACGTCGTCGGCCACCCGGTGCAGGGGGTGCTGCTCGACCTCGGCGTCAGCTCGCTCCAGCTCGACGACGCCGAGCGTGGCTTCTCCTACTCCCGCCCCGCGCCGCTCGACATGCGGATGGACGCCTCCACAGGCCCCACCGCGGCCGACCTGCTGGCCGAGGACGACGAGCGCGAGCTCGCCCGGATCCTGCGCGAGTACGGCGAGGAGCGGTTCGCCCACCGCATCGCGTCCGCGATCGTCCGCGAGCGCGCGACGACGCCGCTGGAGACCTCGACCCAGCTCGCCGAGCTGGTCCAGCGCAGCGTGCCGCGGGCGTCGCAGAAGACCGGGGGACACCCGGCGAAGCGCACGTTCCAGGCCCTGCGGATCGCCGTCAACGGCGAGCTCGACATCCTCGCGGACGCGCTGCCCCGCGCGATCGAGGTGCTCGCGGTCGGCGGCCGGATCGTCGTCGAGAGCTACCACTCGCTCGAGGACCGACTGGTCAAGCGGGCCCTCGCCCGCGGCGCGACCTCGAGCGCCCCGCGCGAGTGGCCGATCGAGCCCGAGACGCACCGGCCCTACCTCGAGCTCGTCGTCCGCGGCGCCGAGAAGGCCGACGACGTGGAGCAGGCCACCAACCCGCGCGCCGCGTCGGTCCGCCTGCGGGCCGCCACCCGAACCCGACCGACCCCCGACCACATGCTCGACGCCGCCTGGAGGACCTCATGA
PROTEIN sequence
Length: 317
RCVELLAPALREPGSVLVDGTLGMGGHSEAVLEARPNASVIGIDRDLQAIDLASRRLARFGERFRAVHATYDEIDEVVADVVGHPVQGVLLDLGVSSLQLDDAERGFSYSRPAPLDMRMDASTGPTAADLLAEDDERELARILREYGEERFAHRIASAIVRERATTPLETSTQLAELVQRSVPRASQKTGGHPAKRTFQALRIAVNGELDILADALPRAIEVLAVGGRIVVESYHSLEDRLVKRALARGATSSAPREWPIEPETHRPYLELVVRGAEKADDVEQATNPRAASVRLRAATRTRPTPDHMLDAAWRTS*