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SCN18_25_8_15_R2_B_scaffold_1452_24

Organism: SCN18_25_8_15_R2_B_CN-SCN_Devosia_27x-related_67_10

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 11 / 38
Location: comp(20399..20992)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 180.0
  • Bit_score: 280
  • Evalue 1.00e-72
Shikimate kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REY0_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 197.0
  • Bit_score: 229
  • Evalue 2.50e-57
shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 197.0
  • Bit_score: 229
  • Evalue 7.20e-58

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Taxonomy

CN-SCN_Devosia_27x → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGTCGAGGGACGCCGCGAGCGGACAGAACGACCGGCGCGAGGAACTGCTGCGGCGCCTCGGCCACCGCCCGATCGTGCTGATCGGCATGATGGGCGCCGGCAAGACCACCGTCGGACGCCGCCTTGCTGCGCGACTGGGCCGCCATTTTGTCGACAGCGACGAGGAGGTGGAAAAGGCCGCCGGCATGACCATTGAGGACATCTTCCGCACCCATGGCGAGGCGGACTTCCGGGCCGGCGAGGTCAAGGTGATCGCTCGCCTGCTGAAGGACGACAACATCGTGCTCGGCACCGGCGGCGGAGCCTTCATCAATCCCGAAACCCGGGCCCTCGTGAAATCCTCGGCCGTCTCGGTCTGGATCAAGGCCGATTTCGAACTGCTGTTCCAGCGCGTCTCGCGCCGCTCGAACCGGCCGCTGCTCAAGACCGCCAACCCGCGCGAGACGCTGCAGAAGCTGATCGACGTGCGCTACCCCGTCTATGCCGAGGCCGACGTCACCGTGGTGTCGCGCGACGTGCCGCAGGACCAGGTCGCCTCCGAGGTCATCGACGCCGTGCTCTCCTATCTCGAGAGGACTGACGCCAATGGCTGA
PROTEIN sequence
Length: 198
MSRDAASGQNDRREELLRRLGHRPIVLIGMMGAGKTTVGRRLAARLGRHFVDSDEEVEKAAGMTIEDIFRTHGEADFRAGEVKVIARLLKDDNIVLGTGGGAFINPETRALVKSSAVSVWIKADFELLFQRVSRRSNRPLLKTANPRETLQKLIDVRYPVYAEADVTVVSRDVPQDQVASEVIDAVLSYLERTDANG*