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SCN18_25_8_15_R2_B_scaffold_3648_12

Organism: SCN18_25_8_15_R2_B_CN-SCN_Devosia_27x-related_67_10

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 11 / 38
Location: 7716..8444

Top 3 Functional Annotations

Value Algorithm Source
ECF family RNA polymerase sigma factor n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHZ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 246.0
  • Bit_score: 310
  • Evalue 1.40e-81
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:CDP50210.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 240.0
  • Bit_score: 389
  • Evalue 1.90e-105
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 246.0
  • Bit_score: 307
  • Evalue 2.60e-81

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Taxonomy

CN-SCN_Devosia_27x → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
GTGAGCCATGCCGACGAGGCAGCCCGGGCCGCCGAGCGCGTTGCGCGCGAAAGCTATGGCCGCCTCGTCGCCTTCCTCGCCGCCCGGACGCGCGACGTCGCGGGCGCCGAGGATGCGCTGGGCGAAGCCTTTGCCGCGGCGCTGCGCCTGTGGCCGCGCGATGGCGTGCCCGACAATCCCGATGCCTGGCTGCTGACCGTCGCCCGCCGACGGCAGACCGATTCCATCCGCCGCCGCCAGACTCGCCATGCGGGGGAGGATCACTTGCAGCTGATCGCCAACGAGATCGAAGCCGCCGCCGGGGACGGCGATGCCATTCCCGACCGCCGCCTCGCCCTGATGTTCGCCTGCGCCCATCCCGCCATCGAGCGCGGCATGCGGGCGCCGCTGATCCTGCAGACCATCCTCGGGCTGACCGCCATCGATATCGCCGCCGCCTTCCTCATCCCGCCCGCCACGATGGGCCAGCGCCTCGTGCGCGCCAAGGCCCGCATCAGGGAGGCCGGCATCCCGTTCGCGGTGCCCGACAAGGAAGAACTGCCCGGGCGGCTCGAGGCCGTGCTCGACGCCATCTATGCCGCCTACACCAAGGGCTGGAACGAACTCGGCGAAACCGCGACGCCCGAACTCGCCGACGAAGCCATCTGGCTGGCCCGCCTCGTCGCCTCGCTGCTGCCCGACGAGCCCGAGGCGAAGGGCATGCTCTCGCTCATGCTCTATACCGCCTCC
PROTEIN sequence
Length: 243
VSHADEAARAAERVARESYGRLVAFLAARTRDVAGAEDALGEAFAAALRLWPRDGVPDNPDAWLLTVARRRQTDSIRRRQTRHAGEDHLQLIANEIEAAAGDGDAIPDRRLALMFACAHPAIERGMRAPLILQTILGLTAIDIAAAFLIPPATMGQRLVRAKARIREAGIPFAVPDKEELPGRLEAVLDAIYAAYTKGWNELGETATPELADEAIWLARLVASLLPDEPEAKGMLSLMLYTAS