ggKbase home page

SCN18_25_8_15_R2_B_scaffold_4157_6

Organism: SCN18_25_8_15_R2_B_CN-SCN_Devosia_27x-related_67_10

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 11 / 38
Location: 5253..6098

Top 3 Functional Annotations

Value Algorithm Source
RpiR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKC6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 276.0
  • Bit_score: 365
  • Evalue 3.20e-98
Predicted transcriptional regulator of the myo-in ositol catabolic operon {ECO:0000313|EMBL:CDP53740.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 279.0
  • Bit_score: 388
  • Evalue 5.00e-105
putative transcriptional regulator of the myo-inositol catabolic operon similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 268.0
  • Bit_score: 350
  • Evalue 4.00e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Devosia_27x → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGGCTGACGCGGATATCAAGTTGGACGAGGCGGCGCCGCGGGACTTTCCCGCCCTGCGCGCGCTGATCGCTGCCCGCGTCCCCACCCTGCCGCGCCGGCTGACCCAGGTCGCGACCTACGCGCTCGACCATCCCGACGAGATCGCCTTCGGCACCGCGGCGAGCGTCGCGCAGGATTCGGGCGTCCAGCCCTCGACCCTCGTCCGCTTCAGCCAGGCCCTTGGCTACCAGGGCTTCACCGACCTGCAGGATGTCTTTCGCGCCCGCCTGCGCGACCGCGTGCCGAGCTACGAGGAGCGCCTGAAGCAGCTGCGCGAGCATGGCGGCGCCAGCACGTCCGGCCTGCTGCTGCAGGGCTTTGCCGATGCCGCCGAGCGCTCCGTCGCCGACCTCCGGGTCAAGCTCGACCCGGCCGTTCTCGACAGGGCGGTCGACATCCTCGCGGGAGCCGACACCATCTACCTCGTCGGCCTTCGCCGCTCGTTCCCGATCACCAGCTACATGGCCTACGCCATGGGCAAGCTGAACGTCCGCAGCGTCCTGGTGGACGGCGTCGCCGGCCTCGGCGCCGAGCAGATCAACTTCATCTCGCCGCGCGACGCGGTGCTGGCGATCAGCTTCACGCCCTATGCCAGCGAGACCGTCAGCCTCGCCCACGCCGCCCGGGCCCGCCAGGCCAAGCTGGTCTCGATCACCGACTCGATCTTTTCCCCCATCGCCTCGATCGCCGACGCCTGGCTCGAGATCGTCGAAGCCGACTTCGAGGGCTTCCGCTCCATGGCGGCAACGATGGCCCTGGCCATGACACTCACGGTGGCAGTGGCCGGGAGGCGCGGGGAGAAGTAG
PROTEIN sequence
Length: 282
MADADIKLDEAAPRDFPALRALIAARVPTLPRRLTQVATYALDHPDEIAFGTAASVAQDSGVQPSTLVRFSQALGYQGFTDLQDVFRARLRDRVPSYEERLKQLREHGGASTSGLLLQGFADAAERSVADLRVKLDPAVLDRAVDILAGADTIYLVGLRRSFPITSYMAYAMGKLNVRSVLVDGVAGLGAEQINFISPRDAVLAISFTPYASETVSLAHAARARQAKLVSITDSIFSPIASIADAWLEIVEADFEGFRSMAATMALAMTLTVAVAGRRGEK*