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SCN18_25_8_15_R2_B_scaffold_5321_9

Organism: SCN18_25_8_15_R2_B_CN-SCN_Devosia_27x-related_67_10

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 11 / 38
Location: 2827..3360

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC24_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 177.0
  • Bit_score: 256
  • Evalue 1.30e-65
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 177.0
  • Bit_score: 292
  • Evalue 4.00e-76
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 177.0
  • Bit_score: 256
  • Evalue 3.80e-66

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_18 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCCCGTACAGGCAAAAAGCCGATCCCAGCGGTCAGTGGCGTCACCGTCACGATCGCCGATCGCACGGTCACCGCGAAGGGGCCGAAGGGCGAGCAGTCGCTGACGCTCATGGATATCGTGAGCGCCAAGCAGACCGATGAGGGCATCGTCATCGAGCCCGCCAACGACAGCAAGGAAGCCCGCGCTGCCTGGGGGACGACCCGCGCGCTGATCAACAACATGGTGATCGGCGTCAAGGACGGGTTCGAGAGGAAGCTGCAGATCCAGGGCGTCGGTTATCGCGCCGCCATGCAGGGCAAGGATCTCAAGCTCTCGCTCGGTTTCAGCCACGAAGTGGTGTTCGAGACCCCCAAGGGGATTACCATCGCTGCGCCGACGCAGACCGAAGTTGTGGTCACCGGTGTCGACAAGCAGCAGGTGGGCCAGGTCGCGGCCGACATTCGCGGCTGGCGTCCGCCGGAGCCCTACAAGGGCAAGGGTGTGCGCTATGTGGGCGAGTACATCGCCCGCAAAGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRTGKKPIPAVSGVTVTIADRTVTAKGPKGEQSLTLMDIVSAKQTDEGIVIEPANDSKEARAAWGTTRALINNMVIGVKDGFERKLQIQGVGYRAAMQGKDLKLSLGFSHEVVFETPKGITIAAPTQTEVVVTGVDKQQVGQVAADIRGWRPPEPYKGKGVRYVGEYIARKEGKKK*