ggKbase home page

SCN18_25_8_15_R2_B_scaffold_5321_10

Organism: SCN18_25_8_15_R2_B_CN-SCN_Devosia_27x-related_67_10

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 11 / 38
Location: 3373..3735

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Methylobacterium sp. 77 RepID=UPI000360E3D0 similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 120.0
  • Bit_score: 159
  • Evalue 1.50e-36
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 120.0
  • Bit_score: 184
  • Evalue 4.70e-44
50S ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 120.0
  • Bit_score: 159
  • Evalue 4.20e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_18 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGCAGACCAAGCTCAATGGTGCGGATCGCCGCAAGGCGCGCGTCCGCAAGGCGCTCAAGGCCAACAATGCCGGCCGTCCGCGTCTGTCCGTGCACCGCACGGGCAAGAACATCTACGCCCAGATCATCGACGACGCCTCGGGCCGGACGCTCGCTGCCGCTTCGACGATCGACAAGGACGTGAAGTCGTCGCTCAAGAACGGCTCGTCTGCGGAGGCCGCGGCCACCGTCGGCAAGCTGATCGCCGAGCGCGGCATCGCCGCAAAGGTTTCCGAGGTCGTGTTCGACCGCGGTGCCTACCTCTACCACGGCCGAGTGAAGGCCCTGGGCGACGCGGCTCGCGAAGCCGGCCTGCAGTTCTGA
PROTEIN sequence
Length: 121
MQTKLNGADRRKARVRKALKANNAGRPRLSVHRTGKNIYAQIIDDASGRTLAAASTIDKDVKSSLKNGSSAEAAATVGKLIAERGIAAKVSEVVFDRGAYLYHGRVKALGDAAREAGLQF*