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SCN18_25_8_15_R2_B_scaffold_5321_11

Organism: SCN18_25_8_15_R2_B_CN-SCN_Devosia_27x-related_67_10

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 11 / 38
Location: 3755..4282

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC22_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 176.0
  • Bit_score: 319
  • Evalue 1.30e-84
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 176.0
  • Bit_score: 328
  • Evalue 2.90e-87
30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 176.0
  • Bit_score: 319
  • Evalue 3.60e-85

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGAGAGACGTTCAAGAGCGCGATAGCGAGTTCGTCGATCGCCTGGTGCACATCAACCGTGTCGCCAAGGTGGTGAAGGGTGGCCGTCGTTTCGGCTTTGCCGCCCTCGTCGTGGTCGGGGACCAGAAGGGCCGCGTCGGCTTTGGTCATGGCAAGGCGCGCGAAGTGCCCGAAGCCATCCGCAAGGCGACCGAGCAGGCCAAGCGCCAGATGATCCGCGTGCCGCTGCGCGAAGCCCGCACCCTGCACCACGATGTCGTGGGTCACCACGGAGCCGGCAAGGTCATTCTGCGTGCCGCCGTTCCCGGTACCGGCATCATCGCCGGCGGTCCGATGCGCGCTGTGTTCGAGACCCTCGGGGTCAACGACATCGTGGCGAAGTCGCAGGGCACCGCCAATCCGTACAACATGGTGCGGGCCACCTTCGATGCGCTGAAGCGCGTCGACAGCCCGCGTTCGGTCGCCGCCCGTCGCGGCCTCAAGGTCTCCGACCTTCAGGCTCGTCGTGGCGAGACCGTCGAAGCCTGA
PROTEIN sequence
Length: 176
MRDVQERDSEFVDRLVHINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEQAKRQMIRVPLREARTLHHDVVGHHGAGKVILRAAVPGTGIIAGGPMRAVFETLGVNDIVAKSQGTANPYNMVRATFDALKRVDSPRSVAARRGLKVSDLQARRGETVEA*