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SCN18_25_8_15_R2_B_scaffold_8544_2

Organism: SCN18_25_8_15_R2_B_CN-SCN_Devosia_27x-related_67_10

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 11 / 38
Location: 691..897

Top 3 Functional Annotations

Value Algorithm Source
Cold shock family protein n=1 Tax=Roseovarius sp. 217 RepID=A3VZA3_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 68.0
  • Bit_score: 103
  • Evalue 7.20e-20
Cold-shock protein {ECO:0000313|EMBL:KKB11151.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 68.0
  • Bit_score: 113
  • Evalue 9.80e-23
cspA; cold shock protein CspA similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 68.0
  • Bit_score: 98
  • Evalue 5.00e-19

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Taxonomy

CN-SCN_Devosia_27x → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGATCAACGGCACCGTGAAATTCTATAACGCAACCAAGGGCTTCGGCTTCATTGCCCCGAGCGATGGCAGCAAGGACGCCTTCGTCCATGCCACCGCGCTCGAGGCCGCCGGCATCATGGGCCTGGCCGAGGGCCAGAAGGTGACCTACGACCTCGAGAGCGGCCGCGACGGCAAGCTCTCGGCCACCAACCTGAACCTCGCCTGA
PROTEIN sequence
Length: 69
MINGTVKFYNATKGFGFIAPSDGSKDAFVHATALEAAGIMGLAEGQKVTYDLESGRDGKLSATNLNLA*