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SCN18_25_8_15_R2_B_scaffold_775_7

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(3708..6041)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 767.0
  • Bit_score: 1457
  • Evalue 0.0
Ribonuclease R n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBC6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 780.0
  • Bit_score: 1023
  • Evalue 6.00e-296
3'-to-5' exoribonuclease RNase R similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 780.0
  • Bit_score: 1023
  • Evalue 1.70e-296

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2334
ATGGCGAGCCAATTTGGCAAAAGCCCAGCAATCCCCTACATATCGGGCAACATGACCACCAAAAAACCAAAACCAAAAAACACCTCGGGCCCGAAGCGCAGCGTTCAACAGCGCGCCGGTGAATTGCCCACGCGCGAACAATTGCTGGAGGCCCTGAAGCAGGACGCCGACATCAAGGGCAAGCGCGACCTCGCAAAAATCTTCGGCATTCGCGGCGATATGCGCCGGCCGTTCAAGGCAATGCTGGCCGAGCTTGAAGGCGAAGGCATCATCACACGCACCCGCAAGGCGCTGCGTCGCACCGCCGCCCTGCCCCATGTGACCGTCCTCGATATTCCGTCCGACGCCGATCCCGACGCGCTCCACGCCTTCCCGGCCCAGTGGAACCCGGAAGAAGGTGAGAAGCCGCGCGTCGAAGTGCTCCTTGCCAAGGATTCGCGCGTCGTCCCGGCTCCGGGCGATCGCATCCTCGCTCGCATCGATGCCGGCGAAGACGAAATCCCCCACTATACCGCCAAGCCGATGAAGGTGCTGGACAAGCCCCGTCGCGGCCAGATCGGCATTGTCCGCATGGACAATGAAGGCGCCCGCCTGATCCCGGTCGATCGCAAGCAGAAGGAAATGCGCATTCCGCTCGGCGATCTCGGCGAAGCCCAGGACGGCGATCTCGTCGAGGTGGAAGTAAAGCTTTCCGGCCGCCTGATGATTCCGCGCGCCCGGGTGACCTCCGTCATCGGCAACCCCGCCTCCGAAGGCGCGGTTTCCATGATCGCGATCCACAATCTCGAAATCCCCTACAAATTCCCGACCAGCGTCATTCGCGACGCCGAAGAGGCCAAGGAAGCGACGCTCAAAGGCCGCGAAGACTGGCGCGACCTGCCGCTCGTCACCATCGACCCGCCCGACGCCAAGGATCATGACGACGCAGTCCACGCCGCGCCCGACGAGGATCCGAAGAACGCCGGCGGCCATGTGGTCACCGTGGCCATCGCCGACGTCGCCGCCTATGTCCGCCCCGGCACCTCGCTCGATCGCGAAGCGTATCTCCGCGGCAACTCGGTCTATTTCCCCGACCGCGTCGTGCCCATGCTGCCCGAGCGCATTTCCAACGAGCTGTGCTCGCTGAAGGAAGGCGAGGCGCGCGCCGCTCTCGCCGTGCGCATGGTGCTCAATGCCGATGGCCACAAGATCAGCCACAGCTTCCATCGCATCCTGATGCGCTCGGCAGCCAAGCTCAGCTATCAGCAGGCCCAGGCCGCCATCGACGGCAATGCCGACGACAAGACGGGCCCTCTGCTCGAGCCCATCCTGCGCCCCCTGTGGGACGCCTATGCCGCCATGGCCTCGGCCCGCGACAAACGCGGCCCGCTCGACCTCGACCTACCCGAGCGGAAAATCATCCTCGACGACAAAGGCATGGTCGCCGATATCCGCATTCCGGAGCGCCTCGAAGCCCATCGCCTCATCGAAGAGATGATGATCGCGGCCAACGTCGCCGCCGCCGAAACGCTGGAACAAAAGCGGAGTGAGCTGCTCTATCGCGTCCATGACGAGCCGAGTTCGGAGAAGCTGCAGAGTCTTCGGGACTTCCTCGGCAGCCTCGACATCGCGGTCAAAAAATCCGATTCCGTCCGCGCGTCCGATTTCAATGGCATCCTCGGCCAGGCCCGCAAGGCCGGCAATGTGGAACAGGTCAGCGAAATGGTGCTGCGCAGCCAGGCGCAGGCCGAATATTCCGCCGAGAATTACGGCCATTTCGGTCTGAACCTCGACCGCTACGCCCACTTCACCTCGCCCATCCGCCGCTACGCCGACCTCATCGTGCACCGCGCTCTGGTGCGTGCCTTGGGCCTCGGCGACGATGGTCTCACCGAGCAGGAAGCGACCAAGCTCCAGGGCATCGCCCAGCACATCTCGGCCACCGAGCGCCGGGCCATGCTGGCCGAGCGCGAGACGTCGGATCGCCTGCTGGCGCAGTTCCTCGCGCAGCGCATCGGCGCGCGTTTTGAAGGCCGCATTTCCGGCATTACCCGTTCCGGACTCTTCATTCGCCTGATCGAAACCGGCGCCGACGGGTTCATTCCGGCGTCGACCCTGGGTCAGGACTATTATCGCTTTGTCGAAGAGCGGCAGGCGATGATCGGGGAGCGCAGCGGCGAGACGTTTACGCTGGGCGACCGCGTCTCGGTCCGCCTGGTCGAAGCGGCACCGGTAGCCGGCGCGCTACGCTTCGAACTTCTCTCGGAGGGAAGCCGCGGCAATCCGCCATCTGGCCGCCGCCCTCGAAAGGCACCATCTAGGAGCTTCGGTCCAAAGGGCCGGAGAAAGCGATAG
PROTEIN sequence
Length: 778
MASQFGKSPAIPYISGNMTTKKPKPKNTSGPKRSVQQRAGELPTREQLLEALKQDADIKGKRDLAKIFGIRGDMRRPFKAMLAELEGEGIITRTRKALRRTAALPHVTVLDIPSDADPDALHAFPAQWNPEEGEKPRVEVLLAKDSRVVPAPGDRILARIDAGEDEIPHYTAKPMKVLDKPRRGQIGIVRMDNEGARLIPVDRKQKEMRIPLGDLGEAQDGDLVEVEVKLSGRLMIPRARVTSVIGNPASEGAVSMIAIHNLEIPYKFPTSVIRDAEEAKEATLKGREDWRDLPLVTIDPPDAKDHDDAVHAAPDEDPKNAGGHVVTVAIADVAAYVRPGTSLDREAYLRGNSVYFPDRVVPMLPERISNELCSLKEGEARAALAVRMVLNADGHKISHSFHRILMRSAAKLSYQQAQAAIDGNADDKTGPLLEPILRPLWDAYAAMASARDKRGPLDLDLPERKIILDDKGMVADIRIPERLEAHRLIEEMMIAANVAAAETLEQKRSELLYRVHDEPSSEKLQSLRDFLGSLDIAVKKSDSVRASDFNGILGQARKAGNVEQVSEMVLRSQAQAEYSAENYGHFGLNLDRYAHFTSPIRRYADLIVHRALVRALGLGDDGLTEQEATKLQGIAQHISATERRAMLAERETSDRLLAQFLAQRIGARFEGRISGITRSGLFIRLIETGADGFIPASTLGQDYYRFVEERQAMIGERSGETFTLGDRVSVRLVEAAPVAGALRFELLSEGSRGNPPSGRRPRKAPSRSFGPKGRRKR*