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SCN18_25_8_15_R2_B_scaffold_1076_59

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(56812..58401)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate binding protein (Oligopeptide) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K4W3_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 531.0
  • Bit_score: 785
  • Evalue 3.20e-224
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAK72799.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 528.0
  • Bit_score: 792
  • Evalue 3.70e-226
ABC transporter substrate binding protein (oligopeptide) similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 531.0
  • Bit_score: 785
  • Evalue 9.10e-225

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1590
ATGGCATTGGATCGTCGTACTTTCCTGCTCGCCGGCACCGCGCTCGGCGGCTCCGTTCTCCTGGGCGGGAGTGCCTTCGGGCAATCATCCAGTCCGCAGCGCGGTGGCGTTGCAACCTTCGTCGCCGTGGGCGAGCCGACAACGCTGGTGCCACTGCTCGATTCCAATACCCGCACCCGCGACATCTCCACCAAAATCCTGGAAGGACTCGTTCGGTTTGACAGCGAGTTCAATGCCCAGCCGGTCCTCGCCACAGATTGGCAGGTCTCGGAGGATGGTTTGCGGCACACCTTCAAGTTGCGTCAGGGCGTAAAGTGGCATGACGGCGCGGATTTCACCTCCGAAGACGTCAAGTTCACGCTGCTTGCCTACAAGGCCGTGGGGCCACGTGGCCGAATAACCTTTGCCAATATCAAGGAGATCGAAACGCCCGATGCGCACACGGCCATCGTGGTTCTCTCAAAGCCGACGCCCTATCTCCTGCGCGCCCTGACCGGTGGGGAAACGCCGATCCTGCCTGCACACGCCTATCCAAGCGATGACTATGCCAGCAGCGCAAATGGCAGTGCCCCAATCGGGACAGGCCCGTTCAAATTCGAGGAATGGCAGCGCGGCAGCTTTGTTCGATTGTCCCGCAATCCGGACTACTGGCAACCCGACCTGCCCTACCTCGATGGTTTCGTCGCCCGTTTCGCCAGCGACGGTGCGGCGGCGGCCGTCGCCATCGAAACCGGTGAGGCCGACTATACCACCGGCGTACCCCTGGCAGAGATCGGTCGTCTGGCTGCGTTGCCGGACATCGAAGTGGACGTCTACACCGACGCCTATCTCAACAACGCCCAGGTATTTGAGTACAAGCTCGAGAATGAAATTCTGGCGAAAACCGAGGTTCGCCACGCGCTGGCCCAGGCCATCGACCGGCAGTTCATTATCGACAATATCTACTACGGAACCGCCAAGGCCGCAGGCTCCAACATCCCCGCGGTCTTCACCGCGTACAATGACGAGGCGCCGTTCCAATATCCCTATGACCCGGCCAAGGCGGCCACTCTGCTCGACGCCGCCGGCTATCCGAAGGGCGCGGACGGCACTCGCTTTTCGCTGAAGCTGACCTTCCTGCCGGGGGACACCTTCAAGAAGACCGCAGAGTATATTCGATCATCGTTCGGCGAACTGGGCGTCAAGGTAGATATCGTCGATGGCGACCTCGCGACCTTCATCAAGCGCGTTTACACGGATCGCGATTTCGACATCAACATCAACGGCATAAGCCGCCTCTTCGACCCGACTGCCGGCGTACAACGCCTCTACTGGTCCGATGGCATCAAGAACATCTCGCCCTACGTAAATGCGGCGCACTACAACAACCCGGAAGTCGATGACCTCTTCCGCTCTGCCGCCGTGGAGGTGGACGAGACCAAGCGCGCTGAAACGTTCAAACGCATCCAGGTCATTGTCGGCAAGGAGCTGCCCAACTTCTCCATCATTGCCCTGCCCACCGTCATCGCCCGCAACGTGCGCATCAATGACATCGTTACGACGATCGATATCGCGTCGAGCGATTTGGCAAAGGCCTGGAAGCAAAGCTAG
PROTEIN sequence
Length: 530
MALDRRTFLLAGTALGGSVLLGGSAFGQSSSPQRGGVATFVAVGEPTTLVPLLDSNTRTRDISTKILEGLVRFDSEFNAQPVLATDWQVSEDGLRHTFKLRQGVKWHDGADFTSEDVKFTLLAYKAVGPRGRITFANIKEIETPDAHTAIVVLSKPTPYLLRALTGGETPILPAHAYPSDDYASSANGSAPIGTGPFKFEEWQRGSFVRLSRNPDYWQPDLPYLDGFVARFASDGAAAAVAIETGEADYTTGVPLAEIGRLAALPDIEVDVYTDAYLNNAQVFEYKLENEILAKTEVRHALAQAIDRQFIIDNIYYGTAKAAGSNIPAVFTAYNDEAPFQYPYDPAKAATLLDAAGYPKGADGTRFSLKLTFLPGDTFKKTAEYIRSSFGELGVKVDIVDGDLATFIKRVYTDRDFDININGISRLFDPTAGVQRLYWSDGIKNISPYVNAAHYNNPEVDDLFRSAAVEVDETKRAETFKRIQVIVGKELPNFSIIALPTVIARNVRINDIVTTIDIASSDLAKAWKQS*