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SCN18_25_8_15_R2_B_scaffold_1482_14

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(11261..11680)

Top 3 Functional Annotations

Value Algorithm Source
Retrovirus-related POL polyprotein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB75_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 137.0
  • Bit_score: 162
  • Evalue 1.60e-37
Glycosyl hydrolase family 5 {ECO:0000313|EMBL:KFL31837.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 139.0
  • Bit_score: 254
  • Evalue 7.30e-65
retrovirus-related POL polyprotein similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 137.0
  • Bit_score: 162
  • Evalue 4.50e-38

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCCTCTGCGCTTCCTTCTCCGCATTCTTGCTGCGCTGGCCTTTGCAGGGCTGGCGCTTGCTGCCGTTCCTGCCAATGCGCAGCCGGTGGCCCATCCTGTCGCGACCCTCGCCGGGCTAGACAAGATTACCGGCCGCATTACCCGCTTCGACGTCTATATCGACGAAACAGTGCTCTTCGGTGCGCTCGAGATCACGCCACGCGCCTGCTACGATCGTCCCTCCAATGACACGCTGCAGCGCACCTCGGTGTTTCTCGAGGTTGATCAGCGCTCGCTGGACGGCACTGCCAAGCGCATCTTCACCGGCTGGATGTTCGCCGACAGCCCGGCGCTCAGCGCTGTCGATCACCCCGTCTATGATGTTTGGCTGATCGAGTGCAAAAACAGCACCAACGTGCCGTCACCGACCCAGCGATAA
PROTEIN sequence
Length: 140
MPLRFLLRILAALAFAGLALAAVPANAQPVAHPVATLAGLDKITGRITRFDVYIDETVLFGALEITPRACYDRPSNDTLQRTSVFLEVDQRSLDGTAKRIFTGWMFADSPALSAVDHPVYDVWLIECKNSTNVPSPTQR*