ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1673_11

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(11639..12547)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BBX1_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 289.0
  • Bit_score: 292
  • Evalue 2.90e-76
LysR family transcriptional regulator {ECO:0000313|EMBL:KFL29679.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 294.0
  • Bit_score: 517
  • Evalue 7.70e-144
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 302.0
  • Bit_score: 290
  • Evalue 5.20e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGATGACCGAAAAGACCTCGACTGGAACCAGATGCGCGCGCTCCTCGCGACGGTCGAGGCCGGGTCGCTTTCGGGCGCGGCGCGAAAGCTGGGGCTGACGCAGCCAACGTTGGGACGGCAGGTGGCGGCGCTGGAGCGGAGCCTGGGGGTTATTCTCTTCGAGCGGGCGGGGCGCGGGCTGGTGCTGACTTCGGCGGGGCGCGAACTGATCGCGCCGCTACGGGCCATGGGCGAGGCGTCGGACACGGTTGCCATGGTGGCCTCGCGCCAGTCGCAGGCGGTGGAAGGACTGGTGCGGATTACGGCGAGCGATGTCTATGCGCAATATCTGCTGCCGCCGATCTTGCTGAAATTGCGGGCGGTGGCGCCAGGGATCACCGTTGACGTGGTGGCGTCCAACGAGGTGGAAGACCTCATTCGTCGCAAGGCCGACATTGCCATTCGCCATGTGCCGCCGCAGGAGGCGGAGCTGATCGCGCGGAGACTGCCGGATACGGTGGCCAAGATTTACGGCACGCCGGAACTGATTGATCGGATCGGCAGGCCGGTTGATGAGCGGGCGCTAGGCCGGGCCGACTTTGTCGGCTATTCGGAAAGTGTCGACATTGTCCTGGCGGAACTGCAGCGCAACGGCCTGAGTTTGAGCGCGGCCAATTTTCCGCTGATGACCAATAGCGGTCTCGTGGCCTGGGACTGGGTGCGGCGCGGCATGTTGCTGGGGCTGATGATGCAGGCTGTGGCAGAGCGGACGCCGGAAGTGGAGGAGGCGTGGCCGGCTTTTGCCGGCGTGCCAGTGCCCACCTGGCTTGCTACCCATCGCGAATTGCGCACGGCGCGGCGGATTCGCGTGGTTTTCGATCTCCTAGCCGAGGGATTGGCGCCACGACAGAACGGCAGTCCGAATTGA
PROTEIN sequence
Length: 303
MDDRKDLDWNQMRALLATVEAGSLSGAARKLGLTQPTLGRQVAALERSLGVILFERAGRGLVLTSAGRELIAPLRAMGEASDTVAMVASRQSQAVEGLVRITASDVYAQYLLPPILLKLRAVAPGITVDVVASNEVEDLIRRKADIAIRHVPPQEAELIARRLPDTVAKIYGTPELIDRIGRPVDERALGRADFVGYSESVDIVLAELQRNGLSLSAANFPLMTNSGLVAWDWVRRGMLLGLMMQAVAERTPEVEEAWPAFAGVPVPTWLATHRELRTARRIRVVFDLLAEGLAPRQNGSPN*