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SCN18_25_8_15_R2_B_scaffold_1365_13

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 9033..9377

Top 3 Functional Annotations

Value Algorithm Source
Type IV secrection system pilin protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5Z6_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 97.0
  • Bit_score: 145
  • Evalue 2.80e-32
Type IV secretion system pilin subunit VirB2 {ECO:0000313|EMBL:KFC70193.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 114.0
  • Bit_score: 203
  • Evalue 9.30e-50
avhB2; type IV secrection system pilin protein similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 97.0
  • Bit_score: 145
  • Evalue 7.90e-33

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGCTCAGAAACTGGCCAACCAAGACCCTCCGCAAATATGGCCTGGCCGTCCCGGTGACGGTCGCGGTGCAGATGGTCTTGCCATCCCATGCCTATGCACAGGGTCAGGGGGGTAGTGGTGGCGCGTTCGGTCCTCTGGAAGCAGCCGTCCAAATGATCGTGGATTTTGTGACCGGTCCTTTTGGCCGGTCGCTGGCGATCATTGCCGTCATCTCTCTTGGTTTCATGGCCTTTGCTGGCCGGCTGTCGTGGTTCACGGCAGGCGCCGTTGTGATCGGCATTGGCTTGGTGTTCGGCGCGCCGGCCATGGTCGATGCGCTGATCGGCACTGTTGGCGGCAACTGA
PROTEIN sequence
Length: 115
MLRNWPTKTLRKYGLAVPVTVAVQMVLPSHAYAQGQGGSGGAFGPLEAAVQMIVDFVTGPFGRSLAIIAVISLGFMAFAGRLSWFTAGAVVIGIGLVFGAPAMVDALIGTVGGN*