ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2336_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(2535..3284)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide ABC transporter, ATP-binding protein LptB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L5_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 243.0
  • Bit_score: 380
  • Evalue 1.10e-102
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL30382.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 249.0
  • Bit_score: 466
  • Evalue 1.70e-128
lipopolysaccharide ABC transporter ATP-binding protein LptB similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 243.0
  • Bit_score: 380
  • Evalue 3.20e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGAGCGAGACGCCGCGAATAGATCAGTCGGGCTGGCTTGTCGCCCAGGGCTTGGCCAAGAGTTTTGGCAAGCGCACGGTGGTGCGGGATGTGTCGCTGGCCGTGCGGCGCGGCGAGGCGGTGGGCCTGCTCGGGCCCAATGGCGCGGGCAAGACCACCGTTTTCACCATGATCATGGGCCTCGTGCGGCCCGATGCCGGGCGCATCCAGCTCGATGGCAATGACATCACCCATTTGCCGCTGTTTCAGCGCGGCCAGCTGGGTGTTGGTTATCTGCCGCAGGAGCCGTCAATTTTCCGCGGCATGACCGTGGAAGGCAATATTCTCGCGATCCTGGAAAATACCGTGCGTGGCCGGGCCGAGCGCAAGCGCCGGCTCGCCCAGCTCCTCGAAGAGTTTTCCATTGCCCATCTCGCCAAGTCCAATGCCCTCTCGCTCTCGGGCGGCGAACGGCGGCGCGTCGAGATTGCGCGGGCGCTGGCGGCCGAGCCCATCTTCATGTTGCTCGACGAACCCTTTGCCGGCGTCGACCCCATCGCCGTGGCGGAGGTAAAGGGCCTCGTGCGGCAATTGACCCAGCGCGGCATCGGTGTCCTCATCACCGACCACGCGGTGCGTGAAACCCTGGGTCTTGTCGATCGCGCCTATGTCATTCACGGCGGCGCGGTGATGATCCAGGGCAAGCCCGAAACCATTTCCGCCAGCCCCGAGGCGCGGCGCGTCTATCTCGGTGAGGGTTTCGAACTTTAG
PROTEIN sequence
Length: 250
MSETPRIDQSGWLVAQGLAKSFGKRTVVRDVSLAVRRGEAVGLLGPNGAGKTTVFTMIMGLVRPDAGRIQLDGNDITHLPLFQRGQLGVGYLPQEPSIFRGMTVEGNILAILENTVRGRAERKRRLAQLLEEFSIAHLAKSNALSLSGGERRRVEIARALAAEPIFMLLDEPFAGVDPIAVAEVKGLVRQLTQRGIGVLITDHAVRETLGLVDRAYVIHGGAVMIQGKPETISASPEARRVYLGEGFEL*