ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3214_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(2768..2947)

Top 3 Functional Annotations

Value Algorithm Source
PilA2 pilus assembly protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2R3_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 58.0
  • Bit_score: 74
  • Evalue 2.40e-11
Uncharacterized protein {ECO:0000313|EMBL:KKB76718.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 59.0
  • Bit_score: 79
  • Evalue 1.40e-12
pilA2; PilA2 pilus assembly protein similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 58.0
  • Bit_score: 74
  • Evalue 6.80e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
ATGAACATTTTCGCACGTTTCGCGCAGGACGAATCCGGCGCCACTGCAATCGAATACGGCCTTATCGCCGCTCTTATCTCTGTCGTCATCATCGGTGTTGTCACGACCGTTGGGACCAACCTGACCTCTGTCTTTGACAATATCGGCGGAGCCCTGAAGCCGAAGACGACAACGCCCTGA
PROTEIN sequence
Length: 60
MNIFARFAQDESGATAIEYGLIAALISVVIIGVVTTVGTNLTSVFDNIGGALKPKTTTP*