ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3557_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(3..467)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide transport ATP-binding protein OppF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCD4_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 148.0
  • Bit_score: 241
  • Evalue 3.00e-61
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB79361.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 155.0
  • Bit_score: 264
  • Evalue 6.00e-68
oligopeptide transport ATP-binding protein OppF similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 148.0
  • Bit_score: 241
  • Evalue 8.40e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_65_23 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGACCGAGCGAATTGACGACGCGCCGCTCCTCAGCCTGCGCAACCTCGTAAAGCGCTTCCCCGGTCGCAATGGCCGCACGGTCCATGCCGTCGAAAATGTCAGTTTCGATATCAGGCGCGGCAGCACCGTCGGTCTTGTAGGCGAAAGCGGTTCGGGCAAGACCACAGTCGGGCGCTCGATCCTGCGTCTTGTCGAGCCCACCGGTGGCGAAGCCATTTTCGATGGCACCGACATTTTTGCGCTCGGCTCGCGAGAGATGCGCGCCTGGCGCAAGCGCCTGCAGATCGTCTTTCAGGACCCCTATTCGAGCCTCAATCCCCGTATGCGGATCGATGCGATCCTGGGCGAAGCGCTCGATGCCTGTGGTTATCCCAAAGGCGCCGCTCGCAAGGAACGTGTGGTCGAACTCATGACCCTGGTTGGTCTGCCACCTGAATATTCCCGGCGTTTCCCGCATGAGTTT
PROTEIN sequence
Length: 155
MTERIDDAPLLSLRNLVKRFPGRNGRTVHAVENVSFDIRRGSTVGLVGESGSGKTTVGRSILRLVEPTGGEAIFDGTDIFALGSREMRAWRKRLQIVFQDPYSSLNPRMRIDAILGEALDACGYPKGAARKERVVELMTLVGLPPEYSRRFPHEF