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SCN18_25_8_15_R2_B_scaffold_4575_8

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(5632..6411)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1VEY0_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 257.0
  • Bit_score: 285
  • Evalue 3.90e-74
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:KCB40041.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 256.0
  • Bit_score: 311
  • Evalue 7.20e-82
helix-turn-helix, AraC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 260.0
  • Bit_score: 272
  • Evalue 9.70e-71

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Taxonomy

SCN_Thiomonas_15x → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGATCGCCCGGACCCACGAGAGATGATCGACACGCCGGGTGCGCCCGAGATTATCGCCATGGCGATCACCAAAGATCTCGTTCTTCCCGGCGCGCAGCATCGACACACGTCGGGACAACTCTATTGCCTCCGGCAAGGTATCATGATGGTCAAATCGGCCCAGGGTCTGCTGGCTAATCCACCTGGCTTGGTGGGATGGATCCCGTCAATGATCGAGCACTCGATCATTACGTCAGGCCCGGTCGAAGGCTGGACAGCCTTTGTGGGACCTCACGCCCTTGCAGACCTGCCAGAGGAGCCTGCCGTTCTGAACTGTTCGGGCCTTGTAGAACCTTTGGTGGAGCGATTAGCCGAATCTCATCAGACGGAGTGGGCGACGGCACGCTATGAGCGCATGGGCTTGGTTTTGCTTGACGAACTTCGGCTGGCAGAACGGACACAGCCGTCCCTCCCCCTGCCAGAAGATCCTCGTTTGCAAGTGATCGCTCGCGCCCTGATGGACGATCCTGCCGATCCGCGTTCTGGCCCCGAACTGGCGCGCTGGGCTGGGATGAGCGCCCGCAGTCTTAGCCGACACTGGACCCAATCGGTGGGGATGAGCCTTGCCAAATATCGGCAGGTGGCGCGAGTGTTCAAATCGCTGGATGAATTATCCAAGGGGGCGAGTGTGCAGCACGCGGCCTGGGCAGTCGGCTTCGAGAGTACCAGCGCCTACATTGCAGCCTTCCGTGCAATTTTTGGCCAGACCCCGCGCAAGTACCTCGGCAAACAAGCATGA
PROTEIN sequence
Length: 260
MDRPDPREMIDTPGAPEIIAMAITKDLVLPGAQHRHTSGQLYCLRQGIMMVKSAQGLLANPPGLVGWIPSMIEHSIITSGPVEGWTAFVGPHALADLPEEPAVLNCSGLVEPLVERLAESHQTEWATARYERMGLVLLDELRLAERTQPSLPLPEDPRLQVIARALMDDPADPRSGPELARWAGMSARSLSRHWTQSVGMSLAKYRQVARVFKSLDELSKGASVQHAAWAVGFESTSAYIAAFRAIFGQTPRKYLGKQA*