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SCN18_25_8_15_R2_B_scaffold_3087_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(1690..2982)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 430.0
  • Bit_score: 753
  • Evalue 9.10e-215
tRNA modification GTPase MnmE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q5_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 436.0
  • Bit_score: 444
  • Evalue 1.10e-121
GTPase and tRNA-U34 5-formylation enzyme TrmE similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 436.0
  • Bit_score: 444
  • Evalue 3.10e-122

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGCTCGCCGGCGATACGATCATGGCGCTCTCCTCGGGCGCTCTTCCCTCCGGCGTTGCGGTTATCCGCCTCTCGGGCCCAAAGGTCCGGGAGGCGTTTTTGCACCTGGCTGGCCACTTGCCGGCGCCCCGCGCAATGGCTTTGCGCCGGATCGGTGCGGATACGCAACTCGACCAGGGTCTGGTAGCGTGGTTTCCGGGCCCCCACAGTTTCACCGGCGAAGACTGCGCGGAATTTCATGTGCATGGCTCGCCGGCGGGCGTGAAAGCCATTTTGCGCGAACTGGGCACTCTGGGCATTCGGCTGGCTGGACCGGGCGAATTCACGCGACGTGCATTCGAAAATGGCAAACTCGATCTGATCGCTGTGGAGGGTCTGGGCGATCTTCTGAGTGCCGAGACAGAAAAGCAGCGGCAACAGGCCTTGGCGCGCTACGATGGTCGGCTCACCGAAAAGGTTGAAACCTGGCGCGACGTCTTGCTCGATCTCCGGGCCGAGATTGAGGCCCGCCTCGATTTTTCTGACGAAGGTGATGTCACCGAGGAACTGCCAGCAAGCTTTTCTGGTGAGCTGGAGGCCCTCAAGGCTTCCCTCGTTGAAGCTCTTGGCAGCATTAATAGTGGTCGTATCGTTCGCGAAGGGGTGCGGGTAGCCCTTGCCGGCGCGCCGAACGCTGGAAAATCGAGCCTTATCAACGCCTTGTCCAAGTCTGACATTGCAATTGTATCGGACGAGGCCGGCACAACGCGCGATGTGCGCGAAGTTCCGCTCGATATCGGCGGCCAGCTTTTCGTTCTTTTGGACCTTGCCGGCCTGCGCCAGACGGATAGCCGTGCGGAAGCCGAAGGCATTCGCAGGGCCGAGCGCGCTATTCAGGACGCAGACATCCTGCTTTGGCTTGAAGCGCCGGATACCGAGATCGCAATTCAACCCGTGACGAATGCAAAAGTCGTCCGGATTGGCACTAAGTCCGATCTTGCCGCTAGCAACGACCACGACCTGCAGATCTCGACGACCAATGGTTCTGGGCTCGATGCCTTGATCGATCAGCTACGGACCATCGGCGAAAACCTCGTTGGCGGCGAACCGTCTTTGATCAGCCACGAGCGTGATCGATCGGGGCTAGAGCAGGCGATCGCGGCAGTCGACGAGTCCGTTCTTTATCTCAGCAACTGGGAACTGGCCGCCGAAGCGCTACGCCATGCTTCGCTGGCGCTGGAGCGAATGATCGGGCGCGTCGATGCGGAGCAAGTGCTGGATCGGCTGTTTTCCAGTTTCTGCATCGGAAAATGA
PROTEIN sequence
Length: 431
MLAGDTIMALSSGALPSGVAVIRLSGPKVREAFLHLAGHLPAPRAMALRRIGADTQLDQGLVAWFPGPHSFTGEDCAEFHVHGSPAGVKAILRELGTLGIRLAGPGEFTRRAFENGKLDLIAVEGLGDLLSAETEKQRQQALARYDGRLTEKVETWRDVLLDLRAEIEARLDFSDEGDVTEELPASFSGELEALKASLVEALGSINSGRIVREGVRVALAGAPNAGKSSLINALSKSDIAIVSDEAGTTRDVREVPLDIGGQLFVLLDLAGLRQTDSRAEAEGIRRAERAIQDADILLWLEAPDTEIAIQPVTNAKVVRIGTKSDLAASNDHDLQISTTNGSGLDALIDQLRTIGENLVGGEPSLISHERDRSGLEQAIAAVDESVLYLSNWELAAEALRHASLALERMIGRVDAEQVLDRLFSSFCIGK*