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SCN18_25_8_15_R2_B_scaffold_5649_8

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 5050..5319

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q603J1_METCA similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 85.0
  • Bit_score: 72
  • Evalue 2.40e-10
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 85.0
  • Bit_score: 72
  • Evalue 6.70e-11
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AAU91051.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 85.0
  • Bit_score: 72
  • Evalue 3.30e-10

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Taxonomy

SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220 → SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGATGAACCGCTATTTTGCAGCCACCAGCCTAGTCATGGTGCTTACCCTGGTTGGGTGCCAACCTGCCCCTGAGAGCACCGAAGAAGCGCAAGCCGTTCGGCCAGTTCTGACCAAGACAATGGCGCTCGAAGGTCAGGCGGCGGACCGGTTTGCCGGTGAAGTAGTAGCGCGCTACGAGGCTACCCTTAGCTTCCGCACCTTTGGTCGGGTGATCAGCCGTTCGGTCGAGATCGGGGATCGAGTAGAGCCCGGACAACAAATCGCGCAA
PROTEIN sequence
Length: 90
MMNRYFAATSLVMVLTLVGCQPAPESTEEAQAVRPVLTKTMALEGQAADRFAGEVVARYEATLSFRTFGRVISRSVEIGDRVEPGQQIAQ