ggKbase home page

SCN18_25_8_15_R2_B_scaffold_5997_6

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 3520..4119

Top 3 Functional Annotations

Value Algorithm Source
GAF domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LI36_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 153.0
  • Bit_score: 214
  • Evalue 6.50e-53
Free methionine-(R)-sulfoxide reductase, contains GAF domain {ECO:0000313|EMBL:CDP53747.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 166.0
  • Bit_score: 229
  • Evalue 3.60e-57
GAF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 153.0
  • Bit_score: 214
  • Evalue 1.80e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_18 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGATCCCGAAATGGAGGCATGCCTCCTACGAACCGCCTTTGGTCGAATGCGTCAGGCCCTTTCCAGAGGTACGCGACCAATCCACGCCCGGAAAAGACACCATGTACCAGTCCGTCGCCACTGACCCAGCCGCCGGCAAGGCCGAACTCTATGGCGAACTCGCCTCGCAGCTGAAGGGGCTCCTGGCAGGCGAACGCAATGCCATAGCCAATGCGGCCAACTTCTCCGCCCTGCTGTTTGATCGCCTTCCCGATCTCAACTGGGCCGGCTTCTATTTCATGGACAGGATGACCGGCGGTCTTGTTGTTGGGCCGTTTCAGGGAAAGCCGGCCTGCGTGCGCATCGCGGTCGGCCGTGGCGTATGCGGCACGGCTGTCGCCGAGCGGCGCACCATGCTGGTGCCGGATGTCCATGCCTTTCCCGGGCACATCGCCTGCGATGCCGCCTCCCGCGCCGAAATCGTCGTGCCGCTTGTCCAGAACTCAGATGTGATCGGCGTCCTCGACCTCGACAGCCCCATGCTGGGGCGCTTCGACCGGGAAGACCAGACCGGTCTTGAACGCCTCGCAGCAATCCTGGTGGAGGGCAGCGATTTCTAG
PROTEIN sequence
Length: 200
MIPKWRHASYEPPLVECVRPFPEVRDQSTPGKDTMYQSVATDPAAGKAELYGELASQLKGLLAGERNAIANAANFSALLFDRLPDLNWAGFYFMDRMTGGLVVGPFQGKPACVRIAVGRGVCGTAVAERRTMLVPDVHAFPGHIACDAASRAEIVVPLVQNSDVIGVLDLDSPMLGRFDREDQTGLERLAAILVEGSDF*