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SCN18_25_8_15_R2_B_scaffold_7749_6

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 3225..3641

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 138.0
  • Bit_score: 232
  • Evalue 1.60e-58
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 138.0
  • Bit_score: 272
  • Evalue 2.60e-70
C4-type zinc finger protein, DksA/TraR family similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 138.0
  • Bit_score: 232
  • Evalue 4.50e-59

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGTCTTCGGTTGATCTTATGGAATACCGGCCGAGTGAAGACGAGCCGTTCATGAACCCGCGGCAGCGGGAATATTTCCGAAACAAGCTGCTGTCCTGGAAGGACGACATCCTTCGAGAGAGCCGGGGCACGCTCGAAAACCTTCAGGAAGAAAGCCAGAACCACCCTGATATGGCCGACCGGGCGAGCTCGGAAAGCGACAGGGCACTGGAACTGAGAACGCGTGATCGCCAGCGCAAGTTGATCGGCAAGATCGACGCGGCGCTGAAGCGCATCGACGATGGCACCTACGGATATTGCGAAGAAACCGGCGATCCCATTGGTGTCGCCCGGCTCGATGCCCGCCCGACCGCCACGCTCAGCCTCGAAGCCCAGGAGCTGCACGAGCGCCGCGAAAAGGTCTACCGCGACGAATGA
PROTEIN sequence
Length: 139
MSSVDLMEYRPSEDEPFMNPRQREYFRNKLLSWKDDILRESRGTLENLQEESQNHPDMADRASSESDRALELRTRDRQRKLIGKIDAALKRIDDGTYGYCEETGDPIGVARLDARPTATLSLEAQELHERREKVYRDE*