ggKbase home page

SCN18_25_8_15_R2_B_scaffold_8675_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 237..803

Top 3 Functional Annotations

Value Algorithm Source
NifU protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8I1_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 189.0
  • Bit_score: 300
  • Evalue 8.50e-79
Iron transporter {ECO:0000313|EMBL:KFL30079.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 188.0
  • Bit_score: 366
  • Evalue 1.80e-98
NifU protein similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 189.0
  • Bit_score: 300
  • Evalue 2.40e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGTTCATCCAGACCGAAGCCACGCCGAACCCGGCCACGCTTAAATTCCTGCCCGGTCGTGATGTGCTGGTCGGCGAGCCGCGCGATTTCCGCAGTGTCGAAACCGCCGAAGCCTCTCCGCTGGCTGCGAGCCTCTTTGGTATTTCCGGCGTCACCGGCGTTTTCCTCGGTTCCGATTTCATCTCGGTGACCAAGGATGACACCAACTGGGCCCACATCAAGCCGGCCATTCTCGGCGTGATCATGGACCACTTCCTCTCCGGCAAGCCGGTCATCGCCGAAGGCGGTGAGGCTGATGTCGATTTCGCCGCCGGCGAAGAATTCTTCGAGGAAGAAGACAAGGAAATGGTCGAGGTCATCAAGGAACTGCTGGCGACGCGCGTGCGTCCGGCAGTGGCCATGGATGGCGGCGACATCATCTTCCGCGGTTTCAAGGAAGGCACCGTCTTCCTCCACATGCAGGGCGCCTGCTCGGGCTGCCCCTCCTCGACCGCCACCCTCAAGAGCGGTATCGAAAATCTCCTCCGCCACTTCGTGCCGGGCGTTGAGTCGGTCCAGCAGGTGTGA
PROTEIN sequence
Length: 189
MFIQTEATPNPATLKFLPGRDVLVGEPRDFRSVETAEASPLAASLFGISGVTGVFLGSDFISVTKDDTNWAHIKPAILGVIMDHFLSGKPVIAEGGEADVDFAAGEEFFEEEDKEMVEVIKELLATRVRPAVAMDGGDIIFRGFKEGTVFLHMQGACSGCPSSTATLKSGIENLLRHFVPGVESVQQV*