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SCN18_25_8_15_R2_B_scaffold_10407_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(213..2924)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 903.0
  • Bit_score: 1719
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC48_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 902.0
  • Bit_score: 1431
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 902.0
  • Bit_score: 1431
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2712
AACAACATCCTGCATCCCGCGAACGGTCAGCCGATCATCGTGCCGAGCCAGGCCATTGTTCTCGGTCTCTACTATCTGTCGATCGTGGCAGAGGGTGAGCCGGGCGAGGGCATGTCGTTCGGTTCCTATGCCGAACTCGAACACGCGCTCGACAACAAGGTCGTCACGCTCCACTCCAAGATCAAAGCTCGCGTTCCTGCCTGGGACGAAAACGGCAAGCAGATCACCCAGATCGTCGACACGACTCCGGGCCGTATGCTGATCGGTCAGATTCTGCCCAAGAATCCGGCTGTGCCCTTCGCCACGGCGAACCAGCTGATGACCAAGAAGATGATCTCCAAGATGATCGACACCGTGTATCGCGGTTGCGGTCAGAAGGAGACGGTCATTTTCTGTGACCGCGTCATGCAGCTCGGCTTCAAGAACGCCTGCGACGCCGGCATTTCGTTCGGCAAGGACGACATGGTTATCCCGCAGTCGAAGTACACGATTGTGGAAGACACCCGTAAGCTGGTCGAGGAATTCGAACAGCAGTACAATGACGGCCTGATCACTCAGGGCGAAAAGTACAACAAGGTCGTCGACGCCTGGGCCAAGTGCGGTGACAAGATCGCCGAAGAGATGATGAAGGGCATTGCTGCCGTTCAGATCGACAAGGAAACGGGTCGTCAGAAGCCGATCAACTCGGTTTACATGATGAGCCACTCCGGTGCTCGTGGTTCACCGGCCCAGATGAAGCAGCTCGCCGGCATGCGCGGCCTTATGGCCAAGCCGGACGGCTCGATCATCGAAACGCCGATCACCGCGAACTTCAAGGAAGGCCTCAACGTTCTTGAGTACTTCAACTCGACCCACGGTGCCCGTAAGGGTCTGGCTGATACCGCTCTGAAGACTGCGAACTCGGGTTACCTGACCCGTCGTCTCGTCGACGTCGCTCAGGACGCGATCATCATCACCGAGGATTGCGGTACCGAGCGAGGCCTCACCATGGAACCGATCGTCGATGCTGGCCAGATCGTGGCCTCTATCGGCCAGCGCGTTCTCGGCCGTACGACTGCCGATGACGTCTTCCATCCGCTGACTGGCGACCTGATCGCTCCGAAGGGCACTCTGCTCGAAGAGAAGCATGTCGACATCATCGAAGAAGCGCGCATCCAGTCGATCCGCATTCGTTCGCCGCTGACCTGCGATCTCCGCCAGGGCTGCTGCGCCGCTTGCTACGGTCGTGACCTTGCTCGCGGTACTCCGGTCAATATCGGTGAAGCTGTCGGCGTTATTGCTGCTCAGTCCATCGGTGAACCCGGCACCCAGCTCACCATGCGTACGTTCCACATCGGTGGTACGGCTCAGGTGGTTGACTCGTCGTTCCTCGAATCCGGCGCCGAAGGCAAGATCGACATCCGTAACCCGAGCCTCGCAACGGTTGCGGACGGCAAGCAGGTCGTCATGGCCCGTAACGTCGCACTCGTCATCCTCGATGCCGAAGGCAAGGAACGTGCGACCCACAAGGTCGCCTACGGCTCCAAGCTCCTCGTCAAGAAGGGCGAACAGGTTCGTCGTGGCCAGCGTCTGGCTGAATGGGACCCCTACACCCGTCCCATCCTTGCCGACGTCGAAGGCGATGTCGTGTTCGAGGATCTGGTCGATGGTGCATCCGTTGCGGAAAACACCGACGAAGCGACCGGCTTCACCAAGCGCGTCGTCATCGACTGGCGCGGCAACCAGCGTGGTGAGGGCCTCAAGCCCGCACTGGCTATTGCCCGCGGCGGTGCCGTGCAGAAGGTGGATCGTGGTGGCGATGCCCGTTACCTGCTCTCCGTCGACGCGGTTATCGCCGTCGAGCCGGGTGAAAAGGTGTCTCCGGGTGACGTTCTCGCGCGTATCCCGCTCGAGTCTGCAAAGACCAAGGACATCACCGGCGGTCTGCCGCGCGTTGCCGAACTCTTCGAAGCTCGTCGTCCGAAGGATCACGCCATCATCGCTGAGATCGATGGTACCATCCGCTTCGGCCGCGACTACAAGAACAAGCGCCGCGTCATCATCGAGCCGACCGAGGAAGGTGCTGATCCCGTCGAATACCTGATCCCGAAGGGCAAGCCGTTCCACCTCCAGGAAGGCGACACCATCGAGAAGGGCGAATACATTCTGGACGGCAACCCCGCTCCTCACGACATCCTTGCTATCAAGGGCGTCGAGGAACTGGCACGCTACCTCGTCAACGAGATCCAGGAAGTTTATCGTCTCCAGGGCGTGTTGATTAACGACAAGCACATCGAAGTGATCGTTCGCCAGATGCTGCAGAAGGTCGAGATCGTCCTGCCGGGTGACTCGGGCCTGCTCAAGGACGAGCAGCTCGACAAGCTCGACTTCGATGAACTCAACGATGCGCTGATCAGCGAAGGCAAGAAGCCGGCAACCGCTAACCCGGTTCTGCTCGGCATCACCAAGGCTTCGCTCCAGACTCGCTCCTTCGTGTCCGCGGCTTCCTTCCAGGAAACCACCCGCGTGCTCACCGAAGCTGCCGTGTCCGGCAAGGCCGACCTTCTCGAAGGCCTCAAGGAAAACGTCATCGTCGGCCGCCTTATCCCGGCCGGTACCGGTGCCGGCCAGTCGAAGGCCAAGCAGATCGCTGCCAAGCGCGACGATCTCATCCTCGAGGAACGCCGCCGCATCGCCGAAACCACTCGCCTGTCGGCTCCCGCCGCCGAGTAA
PROTEIN sequence
Length: 904
NNILHPANGQPIIVPSQAIVLGLYYLSIVAEGEPGEGMSFGSYAELEHALDNKVVTLHSKIKARVPAWDENGKQITQIVDTTPGRMLIGQILPKNPAVPFATANQLMTKKMISKMIDTVYRGCGQKETVIFCDRVMQLGFKNACDAGISFGKDDMVIPQSKYTIVEDTRKLVEEFEQQYNDGLITQGEKYNKVVDAWAKCGDKIAEEMMKGIAAVQIDKETGRQKPINSVYMMSHSGARGSPAQMKQLAGMRGLMAKPDGSIIETPITANFKEGLNVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDAIIITEDCGTERGLTMEPIVDAGQIVASIGQRVLGRTTADDVFHPLTGDLIAPKGTLLEEKHVDIIEEARIQSIRIRSPLTCDLRQGCCAACYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVVDSSFLESGAEGKIDIRNPSLATVADGKQVVMARNVALVILDAEGKERATHKVAYGSKLLVKKGEQVRRGQRLAEWDPYTRPILADVEGDVVFEDLVDGASVAENTDEATGFTKRVVIDWRGNQRGEGLKPALAIARGGAVQKVDRGGDARYLLSVDAVIAVEPGEKVSPGDVLARIPLESAKTKDITGGLPRVAELFEARRPKDHAIIAEIDGTIRFGRDYKNKRRVIIEPTEEGADPVEYLIPKGKPFHLQEGDTIEKGEYILDGNPAPHDILAIKGVEELARYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEIVLPGDSGLLKDEQLDKLDFDELNDALISEGKKPATANPVLLGITKASLQTRSFVSAASFQETTRVLTEAAVSGKADLLEGLKENVIVGRLIPAGTGAGQSKAKQIAAKRDDLILEERRRIAETTRLSAPAAE*