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SCN18_25_8_15_R2_B_scaffold_181_20

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(21072..21692)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFT2_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 180.0
  • Bit_score: 196
  • Evalue 1.50e-47
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 180.0
  • Bit_score: 196
  • Evalue 4.10e-48
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 180.0
  • Bit_score: 196
  • Evalue 2.00e-47

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGTTTCCGCACTCGCCCTGACCGCAGACGGCAAGCGCAAAGCGGGACCTGTTGCGCGAGGAGATTGGTTCGTCGTCTTGTTCGATCCCAATAGTTTGATTGCTGCCATCGCGCACTCCGGTGACAGGGCGGCTTTTGCCAAGCTGTTCGACCATTTCGCGCCACGCGTGAAAGGATTGCTGATGCGCGGCGGCGCCCCGGCCGAGCTGGCCGAGGAGGTCGCGCAGGAAACGCTCCTGGCCGTCTGGCGGAAGGCCGCCCTGTTCGATCCGGCGAAGGCCAGCGCCTCGACCTGGATCGCAACGATCGCGCGCAACCTGCGCATCGACATTGCCCGACGCGAGACCCGGTCGCGGCTGTCGCAAGTTTACGAGATTCTGGATGACGAAGCCCCCGAACAACCTGATGAGACGCTATCCGGCGCGGAACGCGATGCGCGCGTGCGTGCCGCGATGACCCATCTTTCGCCCGACCAGTACCGCGTGGTCGAACTCGCCTTCCTGGAGGAGTTCAGCCACCAGGACGTTGCCGATCGCCTCGCGATCCCGCTGGGCACGGTAAAATCCCGCCTGCGCCTGGCATTGTCGCATTTGCGTGCCCGGCTGGAGGATCTGCGATGA
PROTEIN sequence
Length: 207
MVSALALTADGKRKAGPVARGDWFVVLFDPNSLIAAIAHSGDRAAFAKLFDHFAPRVKGLLMRGGAPAELAEEVAQETLLAVWRKAALFDPAKASASTWIATIARNLRIDIARRETRSRLSQVYEILDDEAPEQPDETLSGAERDARVRAAMTHLSPDQYRVVELAFLEEFSHQDVADRLAIPLGTVKSRLRLALSHLRARLEDLR*