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SCN18_25_8_15_R2_B_scaffold_437_5

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(2238..2855)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain-containing protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CJF1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 203.0
  • Bit_score: 246
  • Evalue 1.20e-62
Cold shock protein CspB {ECO:0000313|EMBL:KFC74351.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 202.0
  • Bit_score: 353
  • Evalue 1.30e-94
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 201.0
  • Bit_score: 242
  • Evalue 6.50e-62

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGTCCGACGAATTCGGTGAGAGCGGGCGGCCACCGATGGGTCCCATCCAGTCACTCAATCGAGTCATGCGGCTCGACGGACCCGGTGATCACGCGTCGGAGGTGCCGGTCGAAATCACCGGCTACGTCAAGTGGTTCGATGTCTCCAAGGGTTATGGCTTCGTCGTGCCGGAGGCGGGCGGCGCGGATGTGCTGCTTCATGTCACGATCCTGAAGCGCGATGGATTCAACGCGATAGCGGAAGGTGCTCGCATCGTGCTCGAAGCCGTTGACAAGGCGCGGGGCCGTCAGGCGGTGCGCGTGCTCTCGATCGACACCACCTCCGGTCGCCATCCTTCCGAGATGCCGATGGCGCGCACCAATGTCGCGATCACGCCGACGAGCGGGCTCGAGCGCATGGTGGTGAAGTGGTTCAACCGTCTGCGCGGTTTCGGCTTCGTCTCGAAGGGCGAGGGTGCGCCCGACATCTTCGTCCATATGGAGACGCTGCGCCGCTACGGTCTCGTCGAACTCGTGCCGGGGCAGACGGTGCTGGTACGCTACGGCCCCGGGCCGAAGGGCTTGATGGCCGCGGAAATCCATCTGGAGCAGAGCGCGGCCGCTACGGTGGCGCATTGA
PROTEIN sequence
Length: 206
MSDEFGESGRPPMGPIQSLNRVMRLDGPGDHASEVPVEITGYVKWFDVSKGYGFVVPEAGGADVLLHVTILKRDGFNAIAEGARIVLEAVDKARGRQAVRVLSIDTTSGRHPSEMPMARTNVAITPTSGLERMVVKWFNRLRGFGFVSKGEGAPDIFVHMETLRRYGLVELVPGQTVLVRYGPGPKGLMAAEIHLEQSAAATVAH*