ggKbase home page

SCN18_25_8_15_R2_B_scaffold_484_13

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(14860..16371)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 495.0
  • Bit_score: 644
  • Evalue 6.90e-182
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 493.0
  • Bit_score: 614
  • Evalue 2.00e-173
PAS domain S-box n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0Q2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 495.0
  • Bit_score: 644
  • Evalue 4.90e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
TTGATCCGTGATGTTGAATCCCCGAAGGCGGCTGCGGCTCTCATCGAGGCGGTGACGGGCATCGGCCTGGTCTTCGTCGACGAGGCGGGTCGGATCGGAAGCTGGAACGCCGGCGCCGAGCAGATCACGGGATGGAGCCGCGTCGAGATTCTGGGCGGCGATCTCGCATGCCTCTTCGTTGCCGCGGATCCGGGTGTGACAGCCGCCCTGCTCGCCGCGGCGCAGGAGGCCGGCAGGACCGAGACGCAGCGCATCTGCCGGCGCCGGGACGGCGCCTCGTTCACTGCCCAACTCTCGATCACGCCGATGAAGGCGCAGCCCGGCAATCCCGGCGGATATGCGCTCGTCCTACGCGACATCTCCGAACAGCTTCAGGCCGAAGAAGCCCACACGGTCCGCGAGGCCCATCTGCGCTCGATCCTCGAAACGATCCCCGATGCCATCGTCGTGATCGACGAGGACGGCCGGATCCAGTCCTTCAGCGCGGCAGCGGCCCGGCAGTTCGGCTACGATTGCAACGAGGTGATCGGCGAGGACGTCAAGATGCTGATGCCCAGCCCCTACCGGCATCACCACGACAGTTACATCAAGCGCTATCTCGCCACCGGCGAGCGCAGGATCGTCGGTATCGGGCGGGTCGTCGTCGGCCAGCGCAAGGATGGCTCGACCTTTCCGATGGAACTCGCCGTCGGCGAGATGCATTCGGGCGGCCGGCGCTATTTCACCGGCTTCATCCGCGATCTGACGGAAAGACAGAAGACCGAAACCCGGCTGCAGGAACTGCAGTCCGAGCTCGTCCACATGTCGCGCTTCACCGCGCTGGGCGAGATGGCGTCAACGCTGGCCCATGAGATCAACCAGCCGCTGACGGCTATCGCGAACTATCTGAAAGGGTGTCGCCGGATTCTCCAACGCATGGAGGGCGGAACCGCCCGCCTTCTGGAGGACGGCGTCGCGAAAGCGGCCGATCAGGCCCTGCGAGCCGGCCAGGTCATCCGACATCTGCGTGAATTCGTGCAGCGGGGCGAAAGCGAGCGCCGGATCGAACCTCTCGCCAAGCTCATCGAGGAGGCCAGCGCGCTGGCCATGGTCGGCGCCCGGGAGAGAGGGGTGCACATCGCCTATCTCCTCGACCCCGGCGCCATCTTCACGCTCGCGGACCGCATCCAGATCCAGCAGGTGCTGCTTAACCTCATCCGCAACGCGATCGAGGCGATGGATGGCCAGGAACGGCGCGAACTGATCGTCGAGACCCGCCGCGTCAGCGAGGAGATGCTGGAGATCTCGGTCCGCGATACCGGCACCGGCCTGGTCCCCGAAATCATCGACCAACTCTTCCAGCCTTTCGTCACGACCAAGCAGCATGGCATGGGCGTCGGGCTCTCGATCTGCCGCACCATCGTCGAGGCTCATGGCGGAAAAATCTGGGCCGAGTCGGAGCAGGGACGCGGAACCTGCTTCACCTTTTCACTGCGCGCAGTCGATCCGGAGGAGCTGGCTCATGCAGGGTGA
PROTEIN sequence
Length: 504
LIRDVESPKAAAALIEAVTGIGLVFVDEAGRIGSWNAGAEQITGWSRVEILGGDLACLFVAADPGVTAALLAAAQEAGRTETQRICRRRDGASFTAQLSITPMKAQPGNPGGYALVLRDISEQLQAEEAHTVREAHLRSILETIPDAIVVIDEDGRIQSFSAAAARQFGYDCNEVIGEDVKMLMPSPYRHHHDSYIKRYLATGERRIVGIGRVVVGQRKDGSTFPMELAVGEMHSGGRRYFTGFIRDLTERQKTETRLQELQSELVHMSRFTALGEMASTLAHEINQPLTAIANYLKGCRRILQRMEGGTARLLEDGVAKAADQALRAGQVIRHLREFVQRGESERRIEPLAKLIEEASALAMVGARERGVHIAYLLDPGAIFTLADRIQIQQVLLNLIRNAIEAMDGQERRELIVETRRVSEEMLEISVRDTGTGLVPEIIDQLFQPFVTTKQHGMGVGLSICRTIVEAHGGKIWAESEQGRGTCFTFSLRAVDPEELAHAG*