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SCN18_25_8_15_R2_B_scaffold_623_11

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(12563..13447)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 294.0
  • Bit_score: 517
  • Evalue 9.80e-144
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 295.0
  • Bit_score: 424
  • Evalue 1.70e-116
Diaminopimelate epimerase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=DAPF_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 295.0
  • Bit_score: 424
  • Evalue 6.10e-116

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGAACGCTCTGGCCAATCGCCGGTTCCTGAAGATGAACGGGCTCGGCAACCAGATCACGGTGCTGGATCTGCGCGGCAGCAAGCATGTCGTGAGCGAAAGCGAAGCCCGCGCCATCGCCTCCGAGCCGCGCGCCCGCTTCGACCAGCTCATGGTGCTGCACGATGCCGCGACGCCCGGCACCGACGCCTTCGTGCGCATCTACAATACCGACGGCTCGGAAGCCGGCGCCTGCGGCAACGGCACGCGCTGCGTCGCCTGGGCCATGATCGCCGATCCTCGGATGGGCGATGCGAGCAAGACCCGCCTTGCGCTCCAGACCAAGGCCGGCCTGCTGCCGGCGGTTCGCGACGGCGAAACGCTCTTCTCTGTCGACATGGGCGCCCCGCGCCTCGCCTGGGACCAGATCCCGCTGGCCGAGCCCTTCGAGGACACCAGCCGCTTCGAATTGCAGATCGGTCCGATCGACGATCCGATCCTGCACACGCCCTGCGCCGTCAACATGGGCAATCCGCATGCCGTCTTCTTCGTCCAAGACCCCTATGCCTACAACCTCGAGCAGATCGGCCCGCTGCTCGAGAACCACCCAATCTTCCCCGACCGCGCCAATATCGAGCTCGCCGCGGTCAAGGCGCCCGATCATATCGTACTGCGCGTCTGGGAGCGCGGCGCCGGCATCACCCAGGCCTGCGGCTCGGGCGCCTGCGCGGCGCTGGTTGCGGGCGTGCGCCGCGAGCTCACCGCGCGCAAGGCGACCGTCAGCCTGCCCGGCGGCGATCTCGCCATCGAATGGCGCGAGCGCGACGGCCATGTCCTGATGACCGGCCCGGTCGAATTCGAATGGGAAGGTACGCTGGACCCGGCGCTGTTCACGAGCGCGGCGTGA
PROTEIN sequence
Length: 295
MNALANRRFLKMNGLGNQITVLDLRGSKHVVSESEARAIASEPRARFDQLMVLHDAATPGTDAFVRIYNTDGSEAGACGNGTRCVAWAMIADPRMGDASKTRLALQTKAGLLPAVRDGETLFSVDMGAPRLAWDQIPLAEPFEDTSRFELQIGPIDDPILHTPCAVNMGNPHAVFFVQDPYAYNLEQIGPLLENHPIFPDRANIELAAVKAPDHIVLRVWERGAGITQACGSGACAALVAGVRRELTARKATVSLPGGDLAIEWRERDGHVLMTGPVEFEWEGTLDPALFTSAA*