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SCN18_25_8_15_R2_B_scaffold_417_24

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(26320..27159)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C361_HYPNA similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 257.0
  • Bit_score: 207
  • Evalue 1.50e-50
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 257.0
  • Bit_score: 207
  • Evalue 4.10e-51
Regulatory protein GntR, HTH:UbiC transcription regulator-associated {ECO:0000313|EMBL:ADZ72259.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 259.0
  • Bit_score: 207
  • Evalue 2.00e-50

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGCCGCCCCTGGCAGGCGATAACTCCATGGCAAACGGGGTCGACGACGGCGACGGGATGCGCGTCCCGCTCTATCACCGGATCTATCTGCAGATGCGGGAGAAGATCCTCGCGGGCGATGTTCCCGAGGACGGGCGTGTGGCTACGGAGAGCGAGATCGCCGAGAGCTATGGCGTGTCGCGCATCACCGCCAGTCGTGCGCTGAACGAGCTCGCCGCGGCCGGTCTGGTGGTCCGTGCGCGCGGCAAGGGCACCAGGGTGAATCCTGTCGGTGTCGCCCGTGCCGAGCCGATCGTTTCGTCAGTCGAGCAACTGGTCGAGCGCATCCGGCGCATGGGAGCCGAGACTTCGGTCCGGCTGGTGAGATGCGACTTCGTCCAGGCCCCTCCGCGCGTCGCGGCCGACCTCAGGATTCCTTCGGGCTCGCCTGTGCAAAGGGCAGTCCGCCTGCGGGAGATCTCGGGGGAGGTTTTCTCGCACCTGACCACGCATGTGCCGGCCGATCTCGGCGAGCGCATCTCGGCGGAGGAGATGGCGAGCGGGCCGCTGATCGGGCTTCTCGAGGGGCTCGGCATCGAGATTGACCGTGCCGAGCAGACCATTTCGGCGACGCTGGCGGACGTTACCGTCGCGCCGCTGCTGGGGGTCGAGCCGGGCAATCCCCTGATGCGAATCGTGAGGGTCGTCTACGATTCGACCGGGCGTCCGGTCGAGCATCTGGTCGCTCTCTATCGTCCCGACCGGTTCCAGTATCACTTCAGCCTTTCCCGTGTTCATTCGCCCCGCACGGGCGGCCACTGGCATGTCGACGATGCTCCGTCCGACATGACGGGGAGCTGA
PROTEIN sequence
Length: 280
MPPLAGDNSMANGVDDGDGMRVPLYHRIYLQMREKILAGDVPEDGRVATESEIAESYGVSRITASRALNELAAAGLVVRARGKGTRVNPVGVARAEPIVSSVEQLVERIRRMGAETSVRLVRCDFVQAPPRVAADLRIPSGSPVQRAVRLREISGEVFSHLTTHVPADLGERISAEEMASGPLIGLLEGLGIEIDRAEQTISATLADVTVAPLLGVEPGNPLMRIVRVVYDSTGRPVEHLVALYRPDRFQYHFSLSRVHSPRTGGHWHVDDAPSDMTGS*