ggKbase home page

SCN18_25_8_15_R2_B_scaffold_368_12

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(9942..11534)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2QZ27_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 531.0
  • Bit_score: 755
  • Evalue 2.70e-215
Peptide/nickel transport system substrate-binding protein {ECO:0000313|EMBL:KFC72874.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 530.0
  • Bit_score: 954
  • Evalue 3.30e-275
Extracellular solute-binding protein, family 5 middle family protein 23 similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 531.0
  • Bit_score: 750
  • Evalue 2.50e-214

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1593
ATGAAATTTGCCCAAAGCTTTCGCCTTGCCGCCTTCGCCGCCCTGCTTGGCGCCACCGTGTCGACCGGCGCGCTGGCCCAGACCCTGACCATCGGCGTCCGCGCCGGACCGGAATCGATCGATCCGCATTTCACCGCGACCGGCACCCATGCCGAGGCGCTGAAGCATGTCTTCGACACGCTGACCTGGTCCGGCGACAAACTGCAGATCGAACCGCGGCTGGCCCTGAGCTGGAAGACGCTGGAGCCGACGGTCTGGGAATTCAAGCTGCGCCCCGGCGTCAAGTTCCATGACGGCTCCGACTTCACCGCCGAGGACGTGAAATTCTCGATCGAGCGCATCCCGGTCGTTGCCGGCCCGAACCCGACGACGATCTACGTCCGGCGCGTCAAGGAGGTGAAGATCATCGACCCGCTGACGGTCCACATCGTTACCGACGGACCGGCGCCCAACCTGCCCAACGATTTCATCCGGCTGTTCATCGTCTCGCACAAGGCCGCCGCCGGCCTGACCAAGGACAACGCCAACGAGGCCTTCAACTCCGGCAAAGCCGCTGTCGGCACCGGCCCCTACAAGTTCGTGTCCTGGACGCCGAAGGACCAGATGGTGCTGGACCGTTTCGACGGCTACTGGGGCGCGAAGGAGCCCTGGGCCAAGGTGGTCCGCAAGGAGCTGCCGAACGATGCCGCCCGTGTCGCGCAGCTCAAGGCGGGCCAGGTCGACATCATCGTGCGCGCGCCGGCCTCCGACGTGCCGACGCTGAAGCGCGACGCCAAGCTCAACGTCACCACGATCGAGAGCGTCTATCTCTTCAACATGGAGCTCGACATGCGGGACAAGTCTCCGCAGATCAGCGCCAAGGACGGCTCGGCCCTGCCGAAGAACCCGCTGCAGGACGTGAAAGTCCGTGAGGCGATCGACCTCGCCATCGACCGGCCGGCGCTGGCGGAGATCGCGATGGAGGGGCTCGGCACCCCGGCCAACCAGTTGGTGACGCCGACCATCGCGGGCTTCAACAAGAGCCTGCCGGCGCTCAAGCCGGATATCGCCAAGGCCAAGAAGCTGCTGGAGGAGGCGGGCTATCCCAATGGCTTCAAGATCTCGTTTTCCTTCACCAACGACCGACTGCCCGGCGACCGGCAGGTCGGCACCTCGATCGCGCAGATGCTGGCCCGGATCGGCATCGAGGTGAACGCCAATGCCCAGCCCGGGGCTGTGTTCTTCCCGGCGCGCCTGCGCGGCGATTTCTCGATGTCGATGTCGGGCTGGGGCACGCTGACGGGCGAAGCGAACTACACGCTGTCCTCGCTGGTGCATTCCAACGACCCGGCCAAGAAGCTCGGCGCCTTCAACGTCCAGAACTACGCCAATCCGCAGGTCGACAAGCTGATCGAGGACGCCGCCGTCGAGATGGACGAGGCCAAGCGCAACCAGATGCTGGCCGATGTCGCGACGATCGTCGCCAAGGATCGGCCGCGCCTGCCGATCGCCGCCGTCGGCTCGGCCTGGGCGATGCAGAAGGACAAGGTGACGATCAGCCCGCGCGTCGACGAGGACACGCTGGCGATGGACATCAAGCCCGCCAAGAAGTAA
PROTEIN sequence
Length: 531
MKFAQSFRLAAFAALLGATVSTGALAQTLTIGVRAGPESIDPHFTATGTHAEALKHVFDTLTWSGDKLQIEPRLALSWKTLEPTVWEFKLRPGVKFHDGSDFTAEDVKFSIERIPVVAGPNPTTIYVRRVKEVKIIDPLTVHIVTDGPAPNLPNDFIRLFIVSHKAAAGLTKDNANEAFNSGKAAVGTGPYKFVSWTPKDQMVLDRFDGYWGAKEPWAKVVRKELPNDAARVAQLKAGQVDIIVRAPASDVPTLKRDAKLNVTTIESVYLFNMELDMRDKSPQISAKDGSALPKNPLQDVKVREAIDLAIDRPALAEIAMEGLGTPANQLVTPTIAGFNKSLPALKPDIAKAKKLLEEAGYPNGFKISFSFTNDRLPGDRQVGTSIAQMLARIGIEVNANAQPGAVFFPARLRGDFSMSMSGWGTLTGEANYTLSSLVHSNDPAKKLGAFNVQNYANPQVDKLIEDAAVEMDEAKRNQMLADVATIVAKDRPRLPIAAVGSAWAMQKDKVTISPRVDEDTLAMDIKPAKK*