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SCN18_25_8_15_R2_B_scaffold_1127_10

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(6311..7144)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 277.0
  • Bit_score: 412
  • Evalue 2.40e-112
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031F6A4B similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 275.0
  • Bit_score: 315
  • Evalue 4.90e-83
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 279.0
  • Bit_score: 305
  • Evalue 1.10e-80

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGTCGCCGCGCTGTTTCGTCATCGGTCATCCCATCGCACATTCGCGCTCGCCCCTGATCCATGGCGAATGGCTGCGCGAACATGGGCTTCCCGGCTCCTATGAACGGATCGATGTCGCTCCGGGCGATCTGGCGACTTTCATCGCGCGTCTGCGCGATGGAGAATTCGCTGGCGGCAATGTCACCGTGCCTCACAAAGAGGCAGTGATGAAGCTGGCCGACGAGGTCAGCGATGCCGGGCGCGCGGTCGGTGCCGTCAACACGCTCTGGCACGAAGGCAATCGGATCATCGCCGATAACAGCGACGTGCCCGGCTTCCTCGCCCATCTCGATGCGACGGTGCCGAACTGGCAGGGCAAGGTCGGCACGGCCCTCGTTCTCGGCGCCGGCGGCGCGGCGCGTGGCATCTGCTACGGCCTGAAGGCGCGCGGTGTCGCGCGCATCCTTGTCGTCAACCGCAGCCCCGAACGCGCGGCCGAACTGGTCGCCGCGCTCGGCCATCCCCTTGAAGCCGGCGATTGGGCCAAGCGCGACAGCCTCGTCGGCGAGGCCGATCTCATCGTCAACACGACGGCTTTGGGCATGCAGGGCAAGCCGCCCCTGGAGATCGATCTCGCGGCCCTGAGACCGGGAACCCTCGTCGACGACATCGTCTATGTTCCCTTGAAGACAGCGCTGCTGGCGGAAGCGGAGCGGCGTGGCGGCGTTCCCGTGGATGGCCTGGGCATGTTGCTGCACCAGGCGGTACCCGGCTTCGCCCGCTGGTTCGGCGTGACGCCGCAGGTGACGCCGGTCCTGCGCGCCCTGATCGAAGCCGATATCCTGAAGGCCTGA
PROTEIN sequence
Length: 278
MSPRCFVIGHPIAHSRSPLIHGEWLREHGLPGSYERIDVAPGDLATFIARLRDGEFAGGNVTVPHKEAVMKLADEVSDAGRAVGAVNTLWHEGNRIIADNSDVPGFLAHLDATVPNWQGKVGTALVLGAGGAARGICYGLKARGVARILVVNRSPERAAELVAALGHPLEAGDWAKRDSLVGEADLIVNTTALGMQGKPPLEIDLAALRPGTLVDDIVYVPLKTALLAEAERRGGVPVDGLGMLLHQAVPGFARWFGVTPQVTPVLRALIEADILKA*