ggKbase home page

SCN18_25_8_15_R2_B_scaffold_5625_11

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(4818..5126)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S10 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A952_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 102.0
  • Bit_score: 198
  • Evalue 3.20e-48
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 201
  • Evalue 3.10e-49
30S ribosomal protein S10 similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 102.0
  • Bit_score: 198
  • Evalue 9.20e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGAACGGTCAGAACATTCGGATCCGCCTCAAGGCGTTCGACCACCGCATCCTCGACGCGTCGACGCGCGAGATCGTGTCGACCGCGAAGCGGACGGGCGCCCAGGTCCGCGGACCGATTCCGCTGCCCACGCTCATCGAGAAGTTCACCGTCAACCGCTCGCCCCACATCGACAAGAAGTCGCGCGAGCAGTTCGAGATGCGGACCCACAAGCGGGTTCTCGATATCGTCGATCCGACTCCCCAGACGGTCGACGCCCTCATGAAGCTCGATCTCGCCGCCGGCGTCGACGTCGAAATCAAGCTTTAA
PROTEIN sequence
Length: 103
MNGQNIRIRLKAFDHRILDASTREIVSTAKRTGAQVRGPIPLPTLIEKFTVNRSPHIDKKSREQFEMRTHKRVLDIVDPTPQTVDALMKLDLAAGVDVEIKL*