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SCN18_25_8_15_R2_B_scaffold_548_21

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 25130..25729

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=3597302 bin=GWF2_Bacteroidetes_49_14 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 193.0
  • Bit_score: 164
  • Evalue 1.00e-37
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 188.0
  • Bit_score: 136
  • Evalue 6.40e-30
Tax=GWF2_Bacteroidetes_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 193.0
  • Bit_score: 164
  • Evalue 1.40e-37

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
TTGAGTGCTTTGGAACAGATATCCCTTCATAATGAGAAAGACCTGTTGCTCCGGGTAGCAGAAGGCAATGAAATTGCTTTCAGAATATTGTATGATCATTATCGCAAAAAAATATACGCTTTAGGTTTATTCCTTACAAAATCCGAAAACCTGGCACAGGAGCTGGTGCAGGATGTGTTTATGAAAATATGGGAGAAGCGTGAGCAACTGAGGAAGATTGATTATTTCAATTCGTGGCTGCGCACCATTGCCCGCAATACCGCTATTAATTATATGCGTGCCAGGGCAATGGAAAAATTGGGCATTAACTATATGCCAACACCTGAAATCAATAATTGCTTTACCGAAAATGATGCTGCCGACCGGGAATATTCTGTGTTATTGCAGGCTGCTGTGAACCAGCTTCCGCCACAGCAGCAAAAAGTATATATGCTTCACCGTCAGCAGGGGCTTTGCCACGAAGCTATTGCCGAACAGCTAGATATATCTGTACTGACCTCTAAAAAATATATGAAGCTGGCGCTTCGTTCCATCCGGATATTCCTGGAGCATCGCATGGATGCCGCAATCTCGCTCGCGCTTGTTATTTATTTTTCCTGA
PROTEIN sequence
Length: 200
LSALEQISLHNEKDLLLRVAEGNEIAFRILYDHYRKKIYALGLFLTKSENLAQELVQDVFMKIWEKREQLRKIDYFNSWLRTIARNTAINYMRARAMEKLGINYMPTPEINNCFTENDAADREYSVLLQAAVNQLPPQQQKVYMLHRQQGLCHEAIAEQLDISVLTSKKYMKLALRSIRIFLEHRMDAAISLALVIYFS*