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SCN18_25_8_15_R2_B_scaffold_506_29

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 35465..37051

Top 3 Functional Annotations

Value Algorithm Source
carbohydrate-binding protein SusD n=1 Tax=Spirosoma panaciterrae RepID=UPI000360C625 similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 532.0
  • Bit_score: 619
  • Evalue 3.00e-174
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 526.0
  • Bit_score: 609
  • Evalue 5.20e-172
RagB/SusD domain protein {ECO:0000313|EMBL:ADB42246.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 526.0
  • Bit_score: 609
  • Evalue 2.60e-171

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1587
ATGAAATCCTTTTATAAATATATAGCACTGGTCGCGGCAGTTTCATCTGTTGCTTTCAGCTCATGCAAAAAAGATATTTTAGATACCGTACCCAATGACAGGGTTTCCACAGCTATTTTCTGGAAAACAGAAACAGATGCCATTTATGCTGTTAACGCTGTGTACGCGTCATTGGATGCCGTTAATTTATTTGTGTTGGATGGTGTTACTGATATAGGGCATACCAATACCACTTTCACTGTTGAATTTAATATTGAAAACGGAACCTATGATGCATCACATTCCAGGATACAGAATGAGTGGCAAAATGGTTATCGCTCTGTTTTCCTGGCTAATGAAGTATTGAATAATATTGATAATATCACTACTTCCAATACAGCGCTTATTGAACGGTTAAAGGCTGAGGCAAGAGTATTAAGGGCCTATTTTTATATAAAGCTTACAGGGCTTTACGGAGATGTGCCATTGGTTACTACTGCAATCAATGTGTCAGAAGGATTGTCTGTTGAACGGACGGCCCAGGCGCAGGTATGGTCATTCATCAATAAAGAATTATCAGAATCGGTAAATGCTTTACCCGCTACTTATAGTGCGGCGGACAAAGGGCGTATAACAAAAGGCGCCGCGTTGGCGCTCAAAGCACGCGCCAACTTGTGGTCAGGCAATTTTGCTGAAGCAGCAGCGGCAGCCAAACAGGTAATGGATCTGAATGTATATGGTTTGACAGATGAATATGAAAAGCTTTTCACCTATGCATCGGAGAATAGCAAAGAAGTGATATTAGATAAGCAATTTCTTGCCGGCACAATTACGCACAATGCTTTTGCATATATGGGGCCATATAGTCAGCGCAACAGCAGCAGTTCCTTTGTGCCTACCAAATCACTAGCTGACCTGTATACCATGAAAAATGGCAAGGACATTAATGAAGCTGGGTCTGGTTTTGATCCTGAGCATCCATATACCAACCGCGATCCGAGAATGAGGTATACGATGTTTGTAGATGGAGATGTATTGCCCAGCGGAATATTGTTTCAGCCGGTACCCGGACAGGGCGGCGCTGATGAAGTAGGGAAAACACAGTATAATACGAGCACAGGATATTCTTTGAAGAAATATATAGTTGCCGATGATCTTGCAACGCCCGGCGCAAGCGGATTGAATTTTATTTTGCTTCGCTATGCAGAAGTATTGCTGACATATGCCGAAGCAAAAATAGAATCCGATGAAATAGATGCTTCTGTATATGATGCTATTAATGCTGTAAGAACGCGGTCTGATGTAGGGCTGCCTGCTTTAAGCACAGGAATGACACAGGATGAGCTTCGTAAAGCAGTGCGGAGGGAAAGAACAGTTGAGCTGGCATTTGAAGGCTGGCATTTATTTGACATCAGGAGATGGAAAACCGCACAAACAGTAATGGCGGGTAAAATCTATGGCATTACTTATTACAGCAACGGGCAGCCTGTTACCGTTGAGGTGCCAAGCGTGAGCAGGGTGTTTGATCCGGCAAAGCATTACCTGTGGCCTGTGCCTCAAAAAGAAAAAACGCTCAATCCTGCTCTCGGTCAAAACCCGGGATGGTGA
PROTEIN sequence
Length: 529
MKSFYKYIALVAAVSSVAFSSCKKDILDTVPNDRVSTAIFWKTETDAIYAVNAVYASLDAVNLFVLDGVTDIGHTNTTFTVEFNIENGTYDASHSRIQNEWQNGYRSVFLANEVLNNIDNITTSNTALIERLKAEARVLRAYFYIKLTGLYGDVPLVTTAINVSEGLSVERTAQAQVWSFINKELSESVNALPATYSAADKGRITKGAALALKARANLWSGNFAEAAAAAKQVMDLNVYGLTDEYEKLFTYASENSKEVILDKQFLAGTITHNAFAYMGPYSQRNSSSSFVPTKSLADLYTMKNGKDINEAGSGFDPEHPYTNRDPRMRYTMFVDGDVLPSGILFQPVPGQGGADEVGKTQYNTSTGYSLKKYIVADDLATPGASGLNFILLRYAEVLLTYAEAKIESDEIDASVYDAINAVRTRSDVGLPALSTGMTQDELRKAVRRERTVELAFEGWHLFDIRRWKTAQTVMAGKIYGITYYSNGQPVTVEVPSVSRVFDPAKHYLWPVPQKEKTLNPALGQNPGW*