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SCN18_25_8_15_R2_B_scaffold_629_21

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(27843..28112)

Top 3 Functional Annotations

Value Algorithm Source
Histone family protein DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 89.0
  • Bit_score: 162
  • Evalue 1.30e-37
DNA-binding protein HU-beta {ECO:0000313|EMBL:GAO41975.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 89.0
  • Bit_score: 167
  • Evalue 5.70e-39
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 89.0
  • Bit_score: 162
  • Evalue 3.70e-38

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 270
ATGAACAAAGCAGAATTAATCGCAAAGATCGCTGATGATGCCGGCATCACAAAAACCCAGGCTAATGATGCATTGGATTCTTTTACAGAAGCCGTTACCAAAACTTTGAAAGGTGGTGGTAAAGTAACATTGGTTGGTTTCGGAACTTTCTCAGTTTCTAAACGTGCTGCACGTAATGGCCGTAACCCTCAGACTGGCGCGGTTATTAAAATCAAAGCTAAAAAAGTTGCCCGCTTTAAAGCCGGCAAAGAATTATCTGCTAAATTATAA
PROTEIN sequence
Length: 90
MNKAELIAKIADDAGITKTQANDALDSFTEAVTKTLKGGGKVTLVGFGTFSVSKRAARNGRNPQTGAVIKIKAKKVARFKAGKELSAKL*