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SCN18_25_8_15_R2_B_scaffold_629_37

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(39204..39800)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor n=1 Tax=Spirosoma luteum RepID=UPI00036D239F similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 183.0
  • Bit_score: 233
  • Evalue 1.80e-58
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 178.0
  • Bit_score: 227
  • Evalue 2.70e-57
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEE48505.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 178.0
  • Bit_score: 227
  • Evalue 1.40e-56

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
GTGTTGTTATCCGTCTACCTGCATATACATACGGGTTTACACGTAATGAGCAATACAAAGCAGCATACAATAGTATCGGTAGTAAGAGATTATGGCGCAAGGCTGTTTAATTTTATCCGCGGCAGGGTGAATACAGATGAAGATGCTGAAGATATACTCCAGGATGTTTGGTATCAAATGAGCAATATGGTAAATATTGATGAGGTGGAAAGTATAAGCGGCTGGCTGTACCGGGTCGCACGGAACAGGCTTACAGATAAATACAGGAAAAAGAAAGATCTTTTGCTGGAAGATGCTTTGCCGGAAAACAGCGAAGACGACCTGCGGGTGATAGATATACTCACAACAGAAGATGACAGCCCGGAATTAAAACAATTCAAATCTTTTTTTTGGGAAGAGTTGATGGCGGCACTGGATGAGCTGCCTGAAAACCAGCGGCAGGCATTTGTATGGAACGAACTGGAAGATATGACCCTGCAGGAAATTGCCGATAAAACCGGTGAAAAGTTAAAAACCATTATCAGCAGAAAAGGTTATGCGGTAAAACATTTGCGCAACCGGCTGGCTGATTTATATAACGAATTAAATATACTGTAA
PROTEIN sequence
Length: 199
VLLSVYLHIHTGLHVMSNTKQHTIVSVVRDYGARLFNFIRGRVNTDEDAEDILQDVWYQMSNMVNIDEVESISGWLYRVARNRLTDKYRKKKDLLLEDALPENSEDDLRVIDILTTEDDSPELKQFKSFFWEELMAALDELPENQRQAFVWNELEDMTLQEIADKTGEKLKTIISRKGYAVKHLRNRLADLYNELNIL*