ggKbase home page

SCN18_25_8_15_R2_B_scaffold_910_18

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 27702..28871

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000313|EMBL:AEV96501.1}; EC=2.3.3.13 {ECO:0000313|EMBL:AEV96501.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 379.0
  • Bit_score: 636
  • Evalue 1.50e-179
2-isopropylmalate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK67_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 379.0
  • Bit_score: 636
  • Evalue 1.00e-179
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 379.0
  • Bit_score: 636
  • Evalue 2.90e-180

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1170
ATGTCAAAAGATAAGATTTATATTTTCGATACCACCCTGCGGGACGGTGAACAGGTACCTGGCTGTAAGCTGAATGCAAACGAAAAGATAGACCTGGCGCTGGCTCTTGAAAACCTTGGCGTTGATATTATTGAGGCAGGATTTCCTGTTTCAAGCCCCGGCGATTTTGCATCTGTGGAAAATATTTCAAAGGTTATTAAGAACGCAACCGTTTGCGGATTGACACGTGCTATTAAAAAAGATATTGAAGTAGCTGCGGAGGCATTGAAAAAGGCAAAAAGACCACGTATACATACCGGTATCGGTGTATCTGATCTCCATATAAAAACAAAATTTAATTCAACAAGAGAAGAGATACTTGCCCGTGCAGTAGAAGCAGTGAAGTTTGCCCGCAATTTTGTGGATGATGTAGAATTTTATGGAGAAGATTCCGGCAGAGCTGATTTAGAATTTTTGGCCCGGGTGGTGGAAGCGGTAATAGCAGCCGGAGCAACAGTAGTTAATATTCCTGATACTACCGGTTATTGCCTTCCGCATCAATATGGTGAAAAGATCGCTTATTTAATAAATAATGTTCCTAATGTAGATAAGGCCATTCTTTCCTGCCATTGTCATAATGACCTGGGATTAGCCACAGCCAATTCTATTGCAGGTGTAATGAGTGGTGCAAGGCAGATTGAGTGTACCATAAATGGTTTGGGCGAAAGAGCAGGTAATACATCGCTTGAAGAAGTGGTGATGATCATCAAACAGCATGATTCATTAGGATTATATACAGATATAAAAGCAGAACAACTGAACCCGATCAGCCGCCTGGTGGCAGATACCATGCGTATGCCGGTTCAACCAAATAAAGCTATTGTCGGCAGCAACGCGTTTGCACATTCGTCCGGTATTCACCAGGATGGATTTTTAAAGAACGCGGAGAATTATGAGATTATTCGCCCTGAAGAAGTGGGCGCCGACAGTTCCAAGATTGTTTTAACAGCAAGAAGCGGACGTTCCGCGCTTGCTCACCGTTTTCAAAAGCTGGGTTTTGATTTCAATCGTAACGACATTGATGCATTATACCAGGCTTTTTTAAAGGTTGCCGATGTGAAAAAAGAAGTAAGTGATGAAGATTTAAAAGCATTGGCCGCCAATAACCATCCGGAAGTAGCAATTGCATAA
PROTEIN sequence
Length: 390
MSKDKIYIFDTTLRDGEQVPGCKLNANEKIDLALALENLGVDIIEAGFPVSSPGDFASVENISKVIKNATVCGLTRAIKKDIEVAAEALKKAKRPRIHTGIGVSDLHIKTKFNSTREEILARAVEAVKFARNFVDDVEFYGEDSGRADLEFLARVVEAVIAAGATVVNIPDTTGYCLPHQYGEKIAYLINNVPNVDKAILSCHCHNDLGLATANSIAGVMSGARQIECTINGLGERAGNTSLEEVVMIIKQHDSLGLYTDIKAEQLNPISRLVADTMRMPVQPNKAIVGSNAFAHSSGIHQDGFLKNAENYEIIRPEEVGADSSKIVLTARSGRSALAHRFQKLGFDFNRNDIDALYQAFLKVADVKKEVSDEDLKALAANNHPEVAIA*