ggKbase home page

SCN18_25_8_15_R2_B_scaffold_929_25

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(29997..31463)

Top 3 Functional Annotations

Value Algorithm Source
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 486.0
  • Bit_score: 793
  • Evalue 1.50e-226
glycyl-tRNA synthetease n=1 Tax=Segetibacter koreensis RepID=UPI0003661282 similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 489.0
  • Bit_score: 805
  • Evalue 2.80e-230
glycyl-tRNA synthetease similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 492.0
  • Bit_score: 769
  • Evalue 4.80e-220

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1467
ATGGCAACTCAAGATAATAACAGGTTCCAGGCGATTATTGCCCACGCAAAAGAATATGGCTTTGTATTTCCCAGCAGCGAAATTTATGATGGACTAAGCGCCGTATACGATTACGGTCCCTGGGGTAGTGAACTGAAAAAAAATATACGCGACTACTGGTGGAAAAGCATGACACAACTACACGAAAATATTGTAGGTGTTGATGCCGCTATATTTATGCATCCCACTACCTGGAAGGCATCCGGTCATGTGGATAATTTCAGCGACCCGATGATTGATAATAAAGACAGCAAAAAAAGATACCGGGTAGATCATCTGATTGAAGCGCATGTAGAAACATTATCCAAAGAAGAAGGAGATGTGTTGATAGCCGCAATGGATAAATTACTTGCAGCAGAAGATTTTACAGGATTAAAAAAATTAATTGAAGACAATAAAATAAAATGCAGCATCAGCGGTACTGCTAACTGGACAGATGTTCGCCAGTTTAACCTGATGTTTAAAACAGAATTCGGTGCCGTTGCCGCAGAAGTAAATGAAGACGAGAATATTGTTTACCTGCGCCCCGAAACCGCGCAGGGTATTTTCGTGAACTTTTTGAATGTGCAGAAAACGGCCAGAATGAAAGTGCCTTTTGGTATTGCTCAAACAGGAAAAGCATTCCGCAATGAAATTGTAGCGCGCCAGTTCATCTTCCGTATGCGTGAATTTGAGCAGATGGAAATGCAGTTCTTTATCCGCCCCGGCACAGAAGGAGATTGGTATAAATACTGGAAAGAAGCAAGGCTGCAATGGCATCTCAGCTTAGGTATTCCTGCTGAAAAATACCGCTACCACGATCACGTAAAACTGGCGCATTATGCCAAGGAAGCCTGTGATATTGAATTCGAATTCCCTATCGGCTTTAAAGAAGTGGAAGGAATTCATAGCCGCAGTGATTATGACCTGAGCCAGCACCAGGTATACAGTAAAAAGAAACTGCAGTATTTTGATAATGATATTGATGAAACAACCGGTAAGCCTTATGGCAATTATGTGCCGTATGTAATTGAAACTTCAATCGGCTTAGACCGTATGTTCCTGCTGATCTTATCACAGGCATATGACGAAGAAGTTATTCCTAGGGAAGACGGGTCTGGAGAAACGCGTACCGTGCTCCGTATTCCTGCAAAGCTTGCTCCCATAAAACTGGCTATTCTTCCGTTAACCAAAAAAGACGGGTTGCCTGAAATAGCAAGAGCAATAATGAATGACTGCCGTGAAGATTTCTATTGCTTTTATGAAGAAAAAGACGCGATAGGTAAACGCTACCGCAGAATGGATGCTATAGGAACACCTTTTTGTATAACAGTTGATCATCAAACAAAAGAAGACCAAACAGTTACTATACGTTACCGTGATACCATGCAGCAGGAGCGTATTGCCATTTCAGATTTACGGGCATTGGTAAAGGAGAAGATAAGGTAG
PROTEIN sequence
Length: 489
MATQDNNRFQAIIAHAKEYGFVFPSSEIYDGLSAVYDYGPWGSELKKNIRDYWWKSMTQLHENIVGVDAAIFMHPTTWKASGHVDNFSDPMIDNKDSKKRYRVDHLIEAHVETLSKEEGDVLIAAMDKLLAAEDFTGLKKLIEDNKIKCSISGTANWTDVRQFNLMFKTEFGAVAAEVNEDENIVYLRPETAQGIFVNFLNVQKTARMKVPFGIAQTGKAFRNEIVARQFIFRMREFEQMEMQFFIRPGTEGDWYKYWKEARLQWHLSLGIPAEKYRYHDHVKLAHYAKEACDIEFEFPIGFKEVEGIHSRSDYDLSQHQVYSKKKLQYFDNDIDETTGKPYGNYVPYVIETSIGLDRMFLLILSQAYDEEVIPREDGSGETRTVLRIPAKLAPIKLAILPLTKKDGLPEIARAIMNDCREDFYCFYEEKDAIGKRYRRMDAIGTPFCITVDHQTKEDQTVTIRYRDTMQQERIAISDLRALVKEKIR*