ggKbase home page

SCN18_25_8_15_R2_B_scaffold_739_17

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 19517..20347

Top 3 Functional Annotations

Value Algorithm Source
TonB family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRW7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 279.0
  • Bit_score: 215
  • Evalue 4.10e-53
Energy transducer TonB {ECO:0000313|EMBL:KIC95904.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 278.0
  • Bit_score: 234
  • Evalue 1.50e-58
TonB family protein similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 279.0
  • Bit_score: 215
  • Evalue 1.10e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 831
ATGGAAAAGAATAAAATTTTGCAGGCAAGTCTGCTCGATATTGTATTTGATAACCGCAACAAAGTATATGGCGCATACGAATTGCGGAGCAGGTATTCAAACCGCTTATTAAAAGCATTATTAAGCACAGGCGCCCTGGCATTGGTTGTTTTGCTGGCTTCTTTTGCAGGATCAAAATTTAAAAGTGAAAGAACTGCTACAGGCTTCGAAAAGAATAGTGTTATATTAATTGATCCTCCTAAAAATGACCCTGTTGTTGAACCGCCTCCTCCACCGCCTCCGGTACAACCAGTAGAGCAACCTCAGATAGAAATGTCCCGCTTAACATCTTCAATTAAAATGGTTGAAGAACTTAAACCTGAAGAGGTGATAAAGGATATTGATGACATGATGGATACTAAGATCAGTACAATAAACCAGGCAGGAGATAAAACTTCAGATATTGTATCTCCACCAATGGAAGACGATCATACCGGAGTTATTATTGGTCCTCAAAAAGAAGAAAAAGATGAAACCCTAATTACTGTTCAGATACAAGCCAAATTTCCCGGTGGCGATGAAGCATGGAGAAAATACATTTCAAGAGAAATAGAACGGCACACCGATGAATTACAGGAAGATGGAAAAGCCGGTACCTGTATAGTACAATTCATTGTAGATAAAGAAGGTAAAATAAGTGATGTAGAGGCGCTGACAATGAAAGGCACCAAACTTGCCGAGCTCTGTGTAAATGCTATTCGCAAAGGTCCGGATTGGACCCCTGCCGAAAATAATGGTATGAAAGTAAAAGCCTGGAGAAAACAACCCGTTACATTCAGGATAAGCGAATAG
PROTEIN sequence
Length: 277
MEKNKILQASLLDIVFDNRNKVYGAYELRSRYSNRLLKALLSTGALALVVLLASFAGSKFKSERTATGFEKNSVILIDPPKNDPVVEPPPPPPPVQPVEQPQIEMSRLTSSIKMVEELKPEEVIKDIDDMMDTKISTINQAGDKTSDIVSPPMEDDHTGVIIGPQKEEKDETLITVQIQAKFPGGDEAWRKYISREIERHTDELQEDGKAGTCIVQFIVDKEGKISDVEALTMKGTKLAELCVNAIRKGPDWTPAENNGMKVKAWRKQPVTFRISE*