ggKbase home page

SCN18_25_8_15_R2_B_scaffold_698_15

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(15059..18115)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B41733 similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 1043.0
  • Bit_score: 602
  • Evalue 4.40e-169
Uncharacterized protein {ECO:0000313|EMBL:ETZ23330.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 1060.0
  • Bit_score: 629
  • Evalue 8.00e-177
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 1066.0
  • Bit_score: 578
  • Evalue 2.50e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3057
ATGAAAGGAGCCTGTTTCCTTGTTGCAGTACTGATGATCTCCTTAATGGGTTATGCGCAGTCAGTAATGACGGGTAAAATTACCGACTCAAATGGTAAACCTGTTGTTGGCGCCTCTGTAGGAATCAAGGGTAAAAGTACCGGTGCTACTACCGATGCCGCCGGTAATTTCCGGATACGGTTGAATGTGGGCGATACCCTGACGCTTTCATCTATAGGATTTGAGTCACGCCAGGTTGTATTCAGAAAAGCCGGTGATCTCTCTATCAGGCTTACCGAGGAAAATAGGACCCTCAGCGATGTAGTCGTTACCGGGTATAAAAGCCAGGCTAAAACAGAAATAACAGGTGCTGTATCCACTATTAAAATGGATAAGATAACAGAAGGGCAGGCCGCGGAATCCTTTGGCTCTCTGCTGCAGGGCAAAGTAGCCGGTGTTAATATACAGTTGAATTCAGGAGAACCCGGCGCCACACCTGCTATAATAATCCGTGGGTTGGCCGCCGTGAGCCGTGGCGATGCTTCCGCCATTTCAGAACCGTTGTATGTGGTGGATGGTATTCCCATTATTTCAAGAATGAGCAGTGAGTTTGCGGTTACCAGCACCAATGTGCTGGCAGATCTTAACCCCAGCGATATAGAAGATGTGGTAGTATTAAAAGATGCTTCTGCTGCCGCTATATACGGCTCCAGGGCAGCAAATGGCGTGATCCTCATCACTACTAAAAAAGGAAAAAGAGGTAAGCCTCAGATAAATCTTAATATTCGCACAGGCGTAAATTTTGTGCCGCAGTTGCGTGATGTTGCCGGTGGCGCTAAAGAGCGGGTGCAGGTTAAACGCCTCTATGATCTCTATGCGCCTTACGGCGTATCCATGCCATCAATGTATACGGATGTTACCAATCCTTTCTACAATAATTCATCAGACTGGCAGGGTTATTTGTATAATACTTCTGTTACACAGGATTACAGCGCCTCCATTCGCGGGGCCGGCGATTTTGGGCAATACAGTATCAGCATGGGTTATATGGATAGCAAAGGTATCCTGTTCAATACAGGGTTTAAACGCTATAGCTTAATGGCCAGCACAGGCTTCAATGCTCTTAAGAATAAGCTGGTCATTAATAATACGCTGGCTGTTTCAAGAACAGACCAGAGCAGAAATGGTGACGCGCTTTCAGTTAATAAGTCAACCCTGCTGCCACTACCGGATAATCCTATGGTACAGGGTGCAGAAGTATATACCCCGGGGTATATGTCTAATCTTAATGACCGTGTTCGTTTCAGTTCTGATGCTACCCTTAACATTGCCCGTAATGTAGCTTATAAGGCCAGTCTTAGCCTGGAGTACCTGCGTACAATGTTTGACTCACTGGCTTCATCAAGACGCACGCTCAGGTTGGGTAATAAGAGCGTTGCCGGTGAAAACCAGAATATGCTTTTCCAGAATACGGTAACGTATACGCCTAAGTTTGGAAACGGGCACAGCCTGAGCATATTGCTGGGGCAGAGCATGGAAAAAACAGAAGCGAAAATAACAAAGGTGAGCAGTGTTGCCGATGCGCCCAGCCTTTCCCAAACGGTGAACTGGCCCCAGGGTAATAGTATCGGCTCAAGTAATTATGGGGCAAGTACCCTCATGTCTTACTTCAGCCGCCTTGATTATAATTTTCAACAAAAGTACCTGCTGGGTGCTTCTATCCGTACAGATGGATCCTCCAAGTTTGGTAAGGCCAACCGCTGGGGTGTTTTCCCTTCTATCTCTGCCGGCTGGAATTTCTATAAAGAAGATATTTTTCGTAATGCCGGCTGGTTAACCAGCGGTAAGATCAGGGGTAGTTATGGGCTTTCCGGAACTACCTGGGATAATAACTACCTGGCACTGGGTATTATGGATGGTGGTAAACTCGATCAGTATAATTCTTTGATACAAATAGCTTATGGTGGTATTTCAGGATTCACACCTACCTGGTATGATGGTTTTAAAAACGATAATCTTACCTGGGTCAAAACCAATATGGCCAATCTTGGTGTAGATTTAAGTTTATTCAAGGGCAAGGTGGAATTCATTTTTGACGCGTATGAAAAAGTAACCAAAGGGTTGCTGTTGTCTACCGCGCTCCCTACTACATCGGGCTATAACGAAGTATACCGCAACGCGGCAGATGTGCTGAACCGTGGGTTGGAGTTTACTGTAAATACCAATCTCAAATTTGGCAGTGATTTTACCTGGAGCACCAATCTCAACTTCGCGTATAATAAAAACAGGGTTATCAGGTTGCCGGACGGTAATGCCGATATTATTAAAGTCAGCACTTCAGGCCAGGATTTCGGCTCTATTGTTCGTGTAGGCGCTCCGCTCAATGGTTTCTTCTTCTATGAATCGCAGGGCATTTATCAGGCAGAAAATCAAATTCCGGTAGACCCCAAAACCGGTAAAAAACTGGTTGGGCTACAAAACAAAAAACTGGAGGTAGGCGATCGTAATTTCAGCGATCAGAACGGGGACTATCTTATTGATGTATCAGACCGTGTGTATTCCGGCGATCCCAACCCGAAATGGAATGGCGGATGGACCAATGATTTTACCTATAAAGGATTCAGCCTTAACCTGGTCACTACTTTCGTGATAGGCAGGGATATTGTGAATACTGCCCTGCTCGACCGGCTCAAATTGGGTAAAGGATTTGCTGGAAGTTCATCCCTTCCCGATTTCGACAAATATTCCATCTGGGAAAAAAGCGGTGATAATGCCAAATATCCAACGCTCAATCCCTGGAGCGATGCCACACAGGTTATCAATTATGATTCCGAGTATATAGAAGACGGTTCTTATTTCAAGATCAGGTCTGCTACCTTGTCTTACACTTTTAATAAAAGAGTAATACAGCGGCTTCCTTTTGAAAGAATGCGTGTATATGTTACGGCGGATAACCTGGCTACTTTCCAGAAATATAGCGGACCAGATGCGGAGCTCATTACAATTGATGGTTTTGACGATTCAAAAGGATATCCGATGCGAAGAATGTTGTTGTTCGGTGTTTCTATTTCACTATAA
PROTEIN sequence
Length: 1019
MKGACFLVAVLMISLMGYAQSVMTGKITDSNGKPVVGASVGIKGKSTGATTDAAGNFRIRLNVGDTLTLSSIGFESRQVVFRKAGDLSIRLTEENRTLSDVVVTGYKSQAKTEITGAVSTIKMDKITEGQAAESFGSLLQGKVAGVNIQLNSGEPGATPAIIIRGLAAVSRGDASAISEPLYVVDGIPIISRMSSEFAVTSTNVLADLNPSDIEDVVVLKDASAAAIYGSRAANGVILITTKKGKRGKPQINLNIRTGVNFVPQLRDVAGGAKERVQVKRLYDLYAPYGVSMPSMYTDVTNPFYNNSSDWQGYLYNTSVTQDYSASIRGAGDFGQYSISMGYMDSKGILFNTGFKRYSLMASTGFNALKNKLVINNTLAVSRTDQSRNGDALSVNKSTLLPLPDNPMVQGAEVYTPGYMSNLNDRVRFSSDATLNIARNVAYKASLSLEYLRTMFDSLASSRRTLRLGNKSVAGENQNMLFQNTVTYTPKFGNGHSLSILLGQSMEKTEAKITKVSSVADAPSLSQTVNWPQGNSIGSSNYGASTLMSYFSRLDYNFQQKYLLGASIRTDGSSKFGKANRWGVFPSISAGWNFYKEDIFRNAGWLTSGKIRGSYGLSGTTWDNNYLALGIMDGGKLDQYNSLIQIAYGGISGFTPTWYDGFKNDNLTWVKTNMANLGVDLSLFKGKVEFIFDAYEKVTKGLLLSTALPTTSGYNEVYRNAADVLNRGLEFTVNTNLKFGSDFTWSTNLNFAYNKNRVIRLPDGNADIIKVSTSGQDFGSIVRVGAPLNGFFFYESQGIYQAENQIPVDPKTGKKLVGLQNKKLEVGDRNFSDQNGDYLIDVSDRVYSGDPNPKWNGGWTNDFTYKGFSLNLVTTFVIGRDIVNTALLDRLKLGKGFAGSSSLPDFDKYSIWEKSGDNAKYPTLNPWSDATQVINYDSEYIEDGSYFKIRSATLSYTFNKRVIQRLPFERMRVYVTADNLATFQKYSGPDAELITIDGFDDSKGYPMRRMLLFGVSISL*