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SCN18_25_8_15_R2_B_scaffold_702_26

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(39883..41028)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7F5_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 342.0
  • Bit_score: 225
  • Evalue 7.10e-56
anti-feci sigma factor, fecr similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 342.0
  • Bit_score: 225
  • Evalue 2.00e-56
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADQ80649.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 342.0
  • Bit_score: 225
  • Evalue 9.90e-56

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1146
ATGTTGGCGTTGCAGGCATGCTGGCATTTTATTGCATTTGTAACCTCCCATGATTTAAAAAAATGGACCGGTCAACCGTCCTGTTTTTATTTCCGGCAGTCTTTATTAAAAGACATTGTGGAAAATGACCAGCTTTTTGTAAAACTTTTTAATAAATATCTCGACAACTGTTGTTCCCCGGATGAAGTGGATTATTTATTCGGGCTGATGCAGTCAGATGAATATAGCCGGTTAGCGAACGAAATGATTGAGCGCCGTTTAAAAAATAACCCGGAACTGAAAGACTCAGACTTTGCATTAAGGGAGCGGCTCGATGCGAGGCTTGCCGCCATATTAGGCAGTGCACCAGATCATAATCACATGCTGATACCGCGCCGGAAAATATATGTGTGGAGATGGATTGCCGCAGCAAGCGTATTATTAGTTCTTCTTGTGAGCTTATACAGGGTTGGATTAAAACCTCATCCTGTTGAAAAAACACCTGTCGCAGGCAGCCCGCCGGCGCCGGCTTCTTTAGTTGGCTATACGCGGTATATAACATTGCCCGACGGCAGTTCTGTTGTGCTTCATGCCGGCAGCAAACTTGAGTATCCAACCGTGTTTGCTGGCAGAGCAAGAGAAGTGAGGCTTTCCGGGGAAGCTTATTTTGATATATTTCGCAATCCTGAAAAGCCATTTATTATTCATACAGGCTCCGTAAAAACTACTGTGCTGGGCACAGCCTTCAATATTAAATCAGACGAAAAAAAGGTAGTTGTTTCCGTTACACGAGGAAAAGTGAAGGTGGAAGACGCAACCAGGATAGTAGCAGTCCTTACGCCGGATCAGCAGATAGAGTATAATATAAAAAAGGCTGAAGGCACTCAGCATATAGTAGATGCTGAAACTGTTGTAACTGACTGGACAAAAGAGACGATGGTATTTAACGGCATTACTTTTGAAGAAATAGGCGCCATATTGAGCCGCAGGTATGGAGTACCGGTGCGATTTGAAAATGAAGCTTTAAAGAAATGCAAAATACGGGCTTCATTTTCCGGAACCGAACCTTTAGATCATGTGGCAAGTGTACTGAGCGCAATAAGGAATGGTAGTTTTGAACAAATTACTGATGGCACTATTGTGTTTACAGGCGAAGGGTGTAATTAA
PROTEIN sequence
Length: 382
MLALQACWHFIAFVTSHDLKKWTGQPSCFYFRQSLLKDIVENDQLFVKLFNKYLDNCCSPDEVDYLFGLMQSDEYSRLANEMIERRLKNNPELKDSDFALRERLDARLAAILGSAPDHNHMLIPRRKIYVWRWIAAASVLLVLLVSLYRVGLKPHPVEKTPVAGSPPAPASLVGYTRYITLPDGSSVVLHAGSKLEYPTVFAGRAREVRLSGEAYFDIFRNPEKPFIIHTGSVKTTVLGTAFNIKSDEKKVVVSVTRGKVKVEDATRIVAVLTPDQQIEYNIKKAEGTQHIVDAETVVTDWTKETMVFNGITFEEIGAILSRRYGVPVRFENEALKKCKIRASFSGTEPLDHVASVLSAIRNGSFEQITDGTIVFTGEGCN*