ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1183_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(2807..3085)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003651D84 similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 80.0
  • Bit_score: 80
  • Evalue 5.20e-13
Xanthan lyase {ECO:0000313|EMBL:KHD90158.1}; Flags: Fragment;; TaxID=1511133 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium Zodletone_IIa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 81.0
  • Bit_score: 67
  • Evalue 1.10e-08
xanthan lyase similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 80.0
  • Bit_score: 65
  • Evalue 6.40e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 279
ATGGCTGCATATAACATGGATCCTCATAACACACAGCGGATTGTATGGAATGGTACGGTTAAGAATGAAGGAGATGTGCAGATTAAAGGCATACAACCTTATACCATTGCCTACCGGGCCATTAACCGGGCAGAAAAGAATGTACCAACCTGCTTGTCCCGGTTTGCTTATCAGCCAGTCATATTGCTTATGGCTCCATCCGGATGGAACCTGTATTTATGTTTTTGGCGCAGTCGGCAGCTATGGCTCTTGATCAGCAATGCCCTGTTCAAACAATAA
PROTEIN sequence
Length: 93
MAAYNMDPHNTQRIVWNGTVKNEGDVQIKGIQPYTIAYRAINRAEKNVPTCLSRFAYQPVILLMAPSGWNLYLCFWRSRQLWLLISNALFKQ*