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SCN18_25_8_15_R2_B_scaffold_1224_21

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 24137..24652

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD/TolR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLF7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 176.0
  • Bit_score: 116
  • Evalue 2.10e-23
Uncharacterized protein {ECO:0000313|EMBL:KIC96359.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 175.0
  • Bit_score: 118
  • Evalue 5.90e-24
biopolymer transport protein ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 176.0
  • Bit_score: 116
  • Evalue 5.90e-24

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 516
ATGGCAGATATCAATACAACTCCTGCGAACAAATCAACAACAACAAATCAACGCCATAGTACAAGGGTTGATATGACACCAATGGTTGATCTTGGGTTTTTACTGATCACATTCTTTATTTTCACTTCAGTAGTAGCAAAGCCTGCCGCGCTAAAGTTTTTATTGCCTGCGGAAGGCACACCTATGCCGGTGCCGAAAACCAAGACAATCACCATTTTACCGGATGATAATAACAGTATTATTTGCTATGAAGGCATTGCAAATGAGCAGCCTGTTATACATCATTTTAAAACCAGCGATAATGGACTTAGGAATTTTATTATGGACAAGCGCAGAAGGATGAGTGACGCCGGCATTTCTCCCGATTCCCTTATTGTAGTAATAAAACCCGGCGACGGAAGTGACTATGGGCAATTGATGAATGTGTTGGATGAAATGGCTATATGCGAGGTTAAACGCCATGCCCTGGCTCCCCGTGATGTGTATGATAAAGAATTGCTCATCGCAGGACATTGA
PROTEIN sequence
Length: 172
MADINTTPANKSTTTNQRHSTRVDMTPMVDLGFLLITFFIFTSVVAKPAALKFLLPAEGTPMPVPKTKTITILPDDNNSIICYEGIANEQPVIHHFKTSDNGLRNFIMDKRRRMSDAGISPDSLIVVIKPGDGSDYGQLMNVLDEMAICEVKRHALAPRDVYDKELLIAGH*