ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1496_16

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 17118..18236

Top 3 Functional Annotations

Value Algorithm Source
ATP synthase subunit a n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZS1_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 374.0
  • Bit_score: 406
  • Evalue 2.90e-110
ATP synthase F0 subunit A similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 374.0
  • Bit_score: 406
  • Evalue 8.10e-111
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 374.0
  • Bit_score: 406
  • Evalue 4.00e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1119
ATGTTCTCAAAAAGCGTCAAATCCTTATTGGTAGCGGTTTTTAGCCTATTTATATGTTTTTATGCTAATACATCATTTTCCCAGGAACATGAACCAAATCATGCTGCGGAAGCGCAGGGTGAAGCAAAACATGGTGAAGAAGGAGATTTTGACGTTACCGGCTTTATCCTTGATCACGTTAAGGATCACCATAGCTGGCATTTATGGGGGCATACTTCTATTCCTTTACCGGTAATTATTAAAACCGATAAAGGTTTTGAAACCTTCTCTTCCGCCAAACTTTCAAACGAACACCACGAGCCGGTAATATATAATGGTAACTATCCTTATAAATTGATTGAAGGAAAGATCAGGATCATGAACGCCGATGGTACAGTAGATGAAGAAGCGTCAAAAAAAGTATTTGATATTTCTATCACCAAAAATGTGGTTTCTTTATTTCTTACTGTTATTCTGCTGATCCTCATTTTCACTTCTGTAGCAAACGCCTATAAAAAAAGAGGTGTAAAATCAGCACCCAAAGGTTTTCAATCATTTATCGAACCCATCATATTATTTGTAAGAGATGAAGTGGCTAAACCCTACCTCGGCCATCAGTATACGAGGTATATGCCATTTCTTTTAACGATTTTCTTTTTTATCTGGATTAACAACCTTTTGGGCCTGGTTCCTTTCTTTCCCGGTGGCGCTAACCTGAGTGGTAATATCGCCTTTACACTTGCATTGGCGCTTTTCACCTTTGTAATTGTAAACGTAAATGGAAAAAAGGATTACTGGAAGCATATTTTCTGGATGCCCGGTCTGCCCACTTTAATGAAGATATTTTTGATGCCTATTGAGTTACTGGGTGTTTTTATTAAACCCATATCACTCACTATCCGGTTATTTGCAAACATCACTGCCGGACATATTTTAGTGATGAGCCTTATATCACTGATATTTATTTTTAAATCAGTAGCTGCTTCAGCAATGGCAGTTCCGTTTACAGTTTTTATCAGTGTTATTGAGTTGCTTGTAGGTTTTTTACAGGCATTTATATTTGCTATGTTATCAGCTTTATATATAGGAATGGCAATTGAAGAGCATCATGATCAGCATGAAGATATTCCTGTGATATAA
PROTEIN sequence
Length: 373
MFSKSVKSLLVAVFSLFICFYANTSFSQEHEPNHAAEAQGEAKHGEEGDFDVTGFILDHVKDHHSWHLWGHTSIPLPVIIKTDKGFETFSSAKLSNEHHEPVIYNGNYPYKLIEGKIRIMNADGTVDEEASKKVFDISITKNVVSLFLTVILLILIFTSVANAYKKRGVKSAPKGFQSFIEPIILFVRDEVAKPYLGHQYTRYMPFLLTIFFFIWINNLLGLVPFFPGGANLSGNIAFTLALALFTFVIVNVNGKKDYWKHIFWMPGLPTLMKIFLMPIELLGVFIKPISLTIRLFANITAGHILVMSLISLIFIFKSVAASAMAVPFTVFISVIELLVGFLQAFIFAMLSALYIGMAIEEHHDQHEDIPVI*